RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 SLC2A3P11169 496 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 ABCB4P21439 1286 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 TACR2P21452 398 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 SNX16P57768 344 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 RPS14P62263 151 aaKnown RBP16.38■□□□□ 0.21
CLN8-205ENST00000520991 ZBTB16Q05516 673 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 TAF5Q15542 800 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 FSCBQ5H9T9 825 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 PITRM1Q5JRX3 1037 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 EFHC1Q5JVL4 640 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 ZNF776Q68DI1 518 aaPredicted RBP16.38■□□□□ 0.21
CLN8-205ENST00000520991 MMS22LQ6ZRQ5 1243 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 PIP4P1Q86T03 277 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 WDTC1Q8N5D0 677 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 C1orf131Q8NDD1 294 aaKnown RBP16.38■□□□□ 0.21
CLN8-205ENST00000520991 RNF34Q969K3 372 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 LMLNQ96KR4 655 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 PCED1AQ9H1Q7 454 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 NDST4Q9H3R1 872 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 SYNCQ9H7C4 482 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.38■□□□□ 0.21
CLN8-205ENST00000520991 DDIT4Q9NX09 232 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 COX16Q9P0S2 106 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 EIF2B4Q9UI10 523 aaKnown RBP16.38■□□□□ 0.21
CLN8-205ENST00000520991 AJAP1Q9UKB5 411 aaPredicted RBP16.38■□□□□ 0.21
CLN8-205ENST00000520991 BCAT2O15382 392 aaPredicted RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 RNASEH1O60930 286 aaKnown RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 HSF2BPO75031 334 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 GRAP2O75791 330 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 CCR1P32246 355 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 ACSL1P33121 698 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 PITX1P78337 314 aaPredicted RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 SIM1P81133 766 aaPredicted RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 VWA3BQ502W6 1294 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 HSP90AA4PQ58FG1 418 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 RNF219Q5W0B1 726 aaPredicted RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 SMYD5Q6GMV2 418 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 OR6B2Q6IFH4 312 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 C11orf57Q6ZUT1 292 aaPredicted RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 FAM183BPQ6ZVS7 135 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 DEFB106AQ8N104 65 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 GANCQ8TET4 914 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 TUBGCP2Q9BSJ2 902 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 BTBD1Q9H0C5 482 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 MTG2Q9H4K7 406 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 C6orf106Q9H6K1 298 aaPredicted RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 SIX2Q9NPC8 291 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 ASNSD1Q9NWL6 643 aa16.37■□□□□ 0.21
CLN8-205ENST00000520991 KIAA1522Q9P206 1035 aaPredicted RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 INTS6Q9UL03 887 aaKnown RBP16.37■□□□□ 0.21
CLN8-205ENST00000520991 SPAARA0A1B0GVQ0 90 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 KCNU1A8MYU2 1149 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 FOXN3O00409 490 aaPredicted RBP16.36■□□□□ 0.21
CLN8-205ENST00000520991 SIN3BO75182 1162 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 SEMA4FO95754 770 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 PNMA6AP0CW24 399 aaPredicted RBP16.36■□□□□ 0.21
CLN8-205ENST00000520991 ERCC5P28715 1186 aaPredicted RBP16.36■□□□□ 0.21
CLN8-205ENST00000520991 BPIFB4P59827 614 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 SLC14A1Q13336 389 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 RAPGEF1Q13905 1077 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 HNRNPA1L2Q32P51 320 aaKnown RBP16.36■□□□□ 0.21
CLN8-205ENST00000520991 RABGAP1LQ5R372 815 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 SLC47A2Q86VL8 602 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 DHX40Q8IX18 779 aaKnown RBP16.36■□□□□ 0.21
CLN8-205ENST00000520991 MYO19Q96H55 970 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 SLC2A13Q96QE2 648 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 RSPH9Q9H1X1 276 aaPredicted RBP16.36■□□□□ 0.21
CLN8-205ENST00000520991 PDCL3Q9H2J4 239 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 ERVW-1Q9UQF0 538 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 NCKAP1Q9Y2A7 1128 aa16.36■□□□□ 0.21
CLN8-205ENST00000520991 ERBB2P04626 1255 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 SRPRAP08240 638 aaKnown RBP16.35■□□□□ 0.21
CLN8-205ENST00000520991 CD59P13987 128 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 SPINK2P20155 84 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 CLCN1P35523 988 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 CTSOP43234 321 aaPredicted RBP16.35■□□□□ 0.21
CLN8-205ENST00000520991 ECT2LQ008S8 904 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 SFSWAPQ12872 951 aaKnown RBP16.35■□□□□ 0.21
CLN8-205ENST00000520991 NME3Q13232 169 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 TTC39BQ5VTQ0 682 aaPredicted RBP16.35■□□□□ 0.21
CLN8-205ENST00000520991 CIR1Q86X95 450 aaPredicted RBP16.35■□□□□ 0.21
CLN8-205ENST00000520991 FAM71AQ8IYT1 594 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 KDM1BQ8NB78 822 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 MRGPRX3Q96LB0 322 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 SGK2Q9HBY8 427 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 PLCB1Q9NQ66 1216 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 SCML1Q9UN30 329 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 FRYQ5TBA9 3013 aa16.35■□□□□ 0.21
CLN8-205ENST00000520991 CEP295Q9C0D2 2601 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 A0A1B0GVM2 712 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 TCAF2A6NFQ2 919 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 TTC34A8MYJ7 566 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 DAB1O75553 588 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 GJB3O75712 270 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 FSBPO95073 299 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 CER1O95813 267 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 C7P10643 843 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 RDXP35241 583 aaKnown RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 AFF3P51826 1226 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms