RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ADAM17P78536 824 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 LPIN1Q14693 890 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 CERCAMQ5T4B2 595 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 OTOP3Q7RTS5 596 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 YTHDF3Q7Z739 585 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 RNF135Q8IUD6 432 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 RELL1Q8IUW5 271 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 PPP4R1Q8TF05 950 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 MYLK2Q9H1R3 596 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 FAM124BQ9H5Z6 455 aaPredicted RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 MTMR10Q9NXD2 777 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 BRCA1P38398 1863 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 PQBP1O60828 265 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 GCATO75600 419 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 RPSAP08865 295 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 AVPR1AP37288 418 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 GSCP56915 257 aaPredicted RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 XRCC4Q13426 336 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 MAPRE1Q15691 268 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 PARP6Q2NL67 630 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 INTS6LQ5JSJ4 861 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 C4orf22Q6V702 233 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 DEFB128Q7Z7B8 93 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 STRA8Q7Z7C7 330 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 ECHDC2Q86YB7 292 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 TDRPQ86YL5 185 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 SENP6Q9GZR1 1112 aaPredicted RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 IARS2Q9NSE4 1012 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 TMLHEQ9NVH6 421 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 SLC39A10Q9ULF5 831 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 A0A0U1RQF3 1178 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 ENDOD1O94919 500 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 MYL2P10916 166 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 ESRRAP11474 423 aaPredicted RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 CYBAP13498 195 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 CCR1P32246 355 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 SLC5A3P53794 718 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 STX3Q13277 289 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 THOC5Q13769 683 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 TAF1BQ53T94 588 aaPredicted RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 GIPC2Q8TF65 315 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 SREK1Q8WXA9 508 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 RSPH1Q8WYR4 309 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 RBM22Q9NW64 420 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLK4-206ENST00000520878 PTCH2Q9Y6C5 1203 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 WDR81Q562E7 1941 aa11.65□□□□□ -0.55
CLK4-206ENST00000520878 HACD1B0YJ81 288 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 HAUS5O94927 633 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 RASSF2P50749 326 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 ACLYP53396 1101 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 COG7P83436 770 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 GRIK3Q13003 919 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 UPP1Q16831 310 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 LRRTM3Q86VH5 581 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 DCP1BQ8IZD4 617 aaKnown RBP11.64□□□□□ -0.55
CLK4-206ENST00000520878 GSTCDQ8NEC7 633 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 SPATA22Q8NHS9 363 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 FBXO32Q969P5 355 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 AZIN2Q96A70 460 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 ZNF395Q9H8N7 513 aaPredicted RBP11.64□□□□□ -0.55
CLK4-206ENST00000520878 RXFP1Q9HBX9 757 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 ACSS2Q9NR19 701 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 PCDHB7Q9Y5E2 793 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 TM9SF1O15321 606 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 GMPRP36959 345 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 GLRBP48167 497 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 ALDH18A1P54886 795 aaKnown RBP11.64□□□□□ -0.55
CLK4-206ENST00000520878 TAZQ16635 292 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 NOMO2Q5JPE7 1267 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 CMC1Q7Z7K0 106 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 ZMIZ2Q8NF64 920 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 OR10T2Q8NGX3 314 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 OR6P1Q8NGX9 317 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 BHMTQ93088 406 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 FCRL2Q96LA5 508 aaPredicted RBP11.64□□□□□ -0.55
CLK4-206ENST00000520878 WDR83Q9BRX9 315 aaKnown RBP11.64□□□□□ -0.55
CLK4-206ENST00000520878 SHCBP1LQ9BZQ2 653 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 TMEM30AQ9NV96 361 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 ARMCX1Q9P291 453 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 FBXW11Q9UKB1 542 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 DSEQ9UL01 958 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 PTPRFP10586 1907 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 A0A1W2PQH9 124 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 PRPF4O43172 522 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLK4-206ENST00000520878 EDF1O60869 148 aaKnown RBP11.64□□□□□ -0.55
CLK4-206ENST00000520878 PAGE1O75459 146 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 TBX18O95935 607 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 ALDH1A1P00352 501 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 NCF2P19878 526 aaPredicted RBP11.64□□□□□ -0.55
CLK4-206ENST00000520878 GPR15P49685 360 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 CCL23P55773 120 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 KDSRQ06136 332 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 N4BP2L1Q5TBK1 243 aaPredicted RBP11.64□□□□□ -0.55
CLK4-206ENST00000520878 RFWD2Q8NHY2 731 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 MFSD3Q96ES6 412 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 SP110Q9HB58 689 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 GGA2Q9UJY4 613 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms