RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 TNPO1Q92973 898 aaKnown RBP6.56□□□□□ -1.36
PABPC1-216ENST00000520868 FUBP3Q96I24 572 aaKnown RBP eCLIP6.56□□□□□ -1.36
PABPC1-216ENST00000520868 MAP3K14Q99558 947 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 C7orf25Q9BPX7 421 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 MXRA8Q9BRK3 442 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 SDF4Q9BRK5 362 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 APOL5Q9BWW9 433 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 TEX101Q9BY14 249 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 LRRC2Q9BYS8 371 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 SERHL2Q9H4I8 314 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 TYW1Q9NV66 732 aaKnown RBP6.56□□□□□ -1.36
PABPC1-216ENST00000520868 DKK2Q9UBU2 259 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 SQORQ9Y6N5 450 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 TECTAO75443 2155 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 DOCK5Q9H7D0 1870 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 TTC3P53804 2025 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 KAT6AQ92794 2004 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 COL4A6Q14031 1691 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 LAMA4Q16363 1823 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 IGSF9BQ9UPX0 1349 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 DENND3A2RUS2 1198 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 DDX39AO00148 427 aaKnown RBP6.55□□□□□ -1.36
PABPC1-216ENST00000520868 MGEA5O60502 916 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 FGF18O76093 207 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 RPLP2P05387 115 aaKnown RBP6.55□□□□□ -1.36
PABPC1-216ENST00000520868 KLRC1P26715 233 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 MCM5P33992 734 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 ALDH1A3P47895 512 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 BLOC1S1P78537 153 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 COL10A1Q03692 680 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 ITGB3BPQ13352 177 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-216ENST00000520868 MED25Q71SY5 747 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 PLPPR4Q7Z2D5 763 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 TRMT1LQ7Z2T5 733 aaKnown RBP6.55□□□□□ -1.36
PABPC1-216ENST00000520868 THNSL1Q8IYQ7 743 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 TMTC2Q8N394 836 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 NME8Q8N427 588 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 OR56A1Q8NGH5 318 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 ADAM2Q99965 735 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 PHF7Q9BWX1 381 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-216ENST00000520868 TOR3AQ9H497 397 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 LDAHQ9H6V9 325 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 ST3GAL5Q9UNP4 418 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 NLRC5Q86WI3 1866 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 ZNF318Q5VUA4 2279 aa6.55□□□□□ -1.36
PABPC1-216ENST00000520868 GRID2IPA4D2P6 1211 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 MARCH11A6NNE9 402 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 CFIP05156 583 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 CALM1P0DP23 149 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 CALM2P0DP24 149 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 CALM3P0DP25 149 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 SP100P23497 879 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-216ENST00000520868 TECP42680 631 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 WASP42768 502 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 NAPAP54920 295 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 VCPP55072 806 aaKnown RBP6.54□□□□□ -1.36
PABPC1-216ENST00000520868 UBE3AQ05086 875 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 SIGLEC14Q08ET2 396 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 TCF15Q12870 199 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 UBXN2BQ14CS0 331 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 SPDYE7PQ495Y7 208 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 CEP55Q53EZ4 464 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 PLPP4Q5VZY2 271 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 SWSAP1Q6NVH7 229 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 PGM2L1Q6PCE3 622 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 SEM1Q6ZVN7 128 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 TMTC3Q6ZXV5 915 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 SLC24A5Q71RS6 500 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 KIAA0319LQ8IZA0 1049 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 FANCBQ8NB91 859 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 COLGALT1Q8NBJ5 622 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 VN1R2Q8NFZ6 395 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 GPR150Q8NGU9 434 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 ATP8B4Q8TF62 1192 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 STON2Q8WXE9 905 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 ATOH1Q92858 354 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-216ENST00000520868 ZG16BQ96DA0 208 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 NEK1Q96PY6 1258 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 NEU1Q99519 415 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 ATP6V0A4Q9HBG4 840 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 AGO4Q9HCK5 861 aaKnown RBP6.54□□□□□ -1.36
PABPC1-216ENST00000520868 ERVK-5Q9HDB9 667 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 RGS18Q9NS28 235 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 MKS1Q9NXB0 559 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 ANKFY1Q9P2R3 1169 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 SIK3Q9Y2K2 1263 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 ZDBF2Q9HCK1 2354 aa6.54□□□□□ -1.36
PABPC1-216ENST00000520868 ZFHX2Q9C0A1 2572 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-216ENST00000520868 RALGAPA2Q2PPJ7 1873 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 NFASCO94856 1347 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 KDM3AQ9Y4C1 1321 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 USP34Q70CQ2 3546 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 COL4A3Q01955 1670 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 SMCO2A6NFE2 343 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 HIDE1A8MVS5 230 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 HBP1O60381 514 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 CCNE2O96020 404 aa6.53□□□□□ -1.36
PABPC1-216ENST00000520868 FOSP01100 380 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-216ENST00000520868 PDGFBP01127 241 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-216ENST00000520868 VTNP04004 478 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms