RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PRSS16Q9NQE7 514 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 BCAT2O15382 392 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 RDXP35241 583 aaKnown RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 RNASE9P60153 205 aaKnown RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 PITX1P78337 314 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 VWA3BQ502W6 1294 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 RABGAP1LQ5R372 815 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 TAF3Q5VWG9 929 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 FAM183BPQ6ZVS7 135 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 TMEM110Q86TL2 294 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 CADM4Q8NFZ8 388 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 SHC3Q92529 594 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 SLC39A13Q96H72 371 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 CPXM1Q96SM3 734 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 TUBGCP2Q9BSJ2 902 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 IRX2Q9BZI1 471 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 NDST4Q9H3R1 872 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 C6orf106Q9H6K1 298 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 FBRSQ9HAH7 460 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 KIAA1522Q9P206 1035 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 AJAP1Q9UKB5 411 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 ADAMTS9Q9P2N4 1935 aa16.7■□□□□ 0.26
IGHV3-42-201ENST00000520410 GTPBP10A4D1E9 387 aaKnown RBP16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 METTL12A8MUP2 240 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 HSF2BPO75031 334 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 SEMA4FO95754 770 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 SLC2A3P11169 496 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 PDGFRAP16234 1089 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 CCR1P32246 355 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 ACSL1P33121 698 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 NNMTP40261 264 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 CTSOP43234 321 aaPredicted RBP16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 PSMD8P48556 350 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 RPL34P49207 117 aaKnown RBP16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 RPS14P62263 151 aaKnown RBP16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 KCNJ12Q14500 433 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 FSCBQ5H9T9 825 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 SLC47A2Q86VL8 602 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 IRF2BP1Q8IU81 584 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 SETD7Q8WTS6 366 aaKnown RBP16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 RPRD1AQ96P16 312 aaPredicted RBP16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 ERVW-1Q9UQF0 538 aa16.69■□□□□ 0.26
IGHV3-42-201ENST00000520410 KCNU1A8MYU2 1149 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 SIN3BO75182 1162 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 CER1O95813 267 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 ERBB2P04626 1255 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 TPM2P07951 284 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 GGCXP38435 758 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 SULT1E1P49888 294 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 SEMA3BQ13214 749 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 TEAD4Q15561 434 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 BEND5Q7L4P6 421 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 KIAA0907Q7Z7F0 614 aaPredicted RBP16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 RPL10LQ96L21 214 aaKnown RBP16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 OMDQ99983 421 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 GAREM1Q9H706 876 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 PCDHGC3Q9UN70 934 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 NCOR2Q9Y618 2525 aa16.68■□□□□ 0.26
IGHV3-42-201ENST00000520410 MUC22E2RYF6 1773 aaPredicted RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 A0A1B0GVT2 93 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 TTC34A8MYJ7 566 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 M0QYT0 321 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 BNIP3LO60238 219 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 SH3BP5O60239 455 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 DAB1O75553 588 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 RNASEH2AO75792 299 aaKnown RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 TOP3BO95985 862 aaKnown RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 GLI1P08151 1106 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 ERCC5P28715 1186 aaPredicted RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 MATKP42679 507 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 BPIFB4P59827 614 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 ECT2LQ008S8 904 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 CENPCQ03188 943 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 ZBTB16Q05516 673 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 SFSWAPQ12872 951 aaKnown RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 ACCSLQ4AC99 568 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 SND1Q7KZF4 910 aaKnown RBP eCLIP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 MMAAQ8IVH4 418 aaKnown RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 NAXDQ8IW45 347 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 APCDD1Q8J025 514 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 TTC17Q96AE7 1141 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 CAMK1GQ96NX5 476 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 ZDHHC5Q9C0B5 715 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 SIK2Q9H0K1 926 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 SIX2Q9NPC8 291 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 FBXL12Q9NXK8 326 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 TAB2Q9NYJ8 693 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 SLC25A13Q9UJS0 675 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 INTS6Q9UL03 887 aaKnown RBP16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 VANGL2Q9ULK5 521 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 FHOD1Q9Y613 1164 aa16.67■□□□□ 0.26
IGHV3-42-201ENST00000520410 EDDM13A0A1B0GTR0 161 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 A0A1W2PP55 124 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 MID1O15344 667 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 HYAL3O43820 417 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms