RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 LHX1P48742 406 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 ALDH7A1P49419 539 aaKnown RBP12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 DLG4P78352 724 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 CDH18Q13634 790 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 KCNT1Q5JUK3 1230 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 NT5DC1Q5TFE4 455 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 AGAP9Q5VTM2 703 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 NIPA1Q7RTP0 329 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 TAS1R2Q8TE23 839 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 FAM111AQ96PZ2 611 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 PDCD2LQ9BRP1 358 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 TRPM5Q9NZQ8 1165 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 CRLS1Q9UJA2 301 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 SDR42E2A6NKP2 422 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 ZNF12P17014 697 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 POU4F1Q01851 419 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 GRIK3Q13003 919 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 LPIN1Q14693 890 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 TAF13Q15543 124 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 TTC27Q6P3X3 843 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 FAM83AQ86UY5 434 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 CLVS1Q8IUQ0 354 aaPredicted RBP12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 USP13Q92995 863 aaPredicted RBP12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
ERGIC1-208ENST00000520399 COQ9O75208 318 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 SMNDC1O75940 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 PDE9AO76083 593 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 CHN2P52757 468 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 NR1H2P55055 460 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 MYL6P60660 151 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 BST2Q10589 180 aaKnown RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 PPP1R15BQ5SWA1 713 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 HPS1Q92902 700 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 CNPY3Q9BT09 278 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 VTA1Q9NP79 307 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 CISHQ9NSE2 258 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 GPATCH2LQ9NWQ4 482 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 TRMT6Q9UJA5 497 aaKnown RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 DGKIO75912 1065 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 PIK3R1P27986 724 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 NRG3P56975 720 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 ZSCAN18Q8TBC5 510 aaPredicted RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 ARHGAP20Q9P2F6 1191 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 ANAPC2Q9UJX6 822 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 VAV3Q9UKW4 847 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 BCL9O00512 1426 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 DPPA5A6NC42 116 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 ZW10O43264 779 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 PMPCBO75439 489 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 ACO1P21399 889 aaKnown RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 STX5Q13190 355 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 MLPHQ9BV36 600 aaPredicted RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 KIAA1683Q9H0B3 1180 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 OSGEPQ9NPF4 335 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 TRNAU1APQ9NX07 287 aaKnown RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 WWOXQ9NZC7 414 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 AP4E1Q9UPM8 1137 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 RUVBL2Q9Y230 463 aaKnown RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 FADS3Q9Y5Q0 445 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 RAD51BO15315 384 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 IL6P05231 212 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 SARSP49591 514 aaKnown RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 FKBP1AP62942 108 aaKnown RBP12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 FBXO32Q969P5 355 aa12.36□□□□□ -0.43
ERGIC1-208ENST00000520399 ZNF286BP0CG31 522 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 RARGP13631 454 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 TAL1P17542 331 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 PTPN1P18031 435 aaKnown RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 RRM1P23921 792 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CNTFP26441 200 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 S100GP29377 79 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 ERFP50548 548 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CCNG2Q16589 344 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 DGKKQ5KSL6 1271 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 NBPF12Q5TAG4 269 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 KLHL17Q6TDP4 642 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CACTIN-AS1Q8N1I8 211 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CAVIN3Q969G5 261 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 RMND5BQ96G75 393 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 FAR2Q96K12 515 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 RPRD1AQ96P16 312 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 PNMA5Q96PV4 448 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 DCUN1D5Q9BTE7 237 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 RNF112Q9ULX5 631 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 PNMA8CA0A1B0GUJ8 204 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 HOXA2O43364 376 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 EPHX2P34913 555 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 OAZ1P54368 228 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 MRNIPQ6NTE8 343 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 LRRC8DQ7L1W4 858 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SPIRE2Q8WWL2 714 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CLIC5Q9NZA1 410 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 RPS6KL1Q9Y6S9 549 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 C2CD2LO14523 706 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 KPNA6O60684 536 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms