RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 AKR1A1P14550 325 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 SLC12A2P55011 1212 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 C21orf58P58505 322 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 RAPGEF1Q13905 1077 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 DAZAP2Q15038 168 aaPredicted RBP4.13□□□□□ -1.75
VPS13B-207ENST00000518569 TAF5Q15542 800 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 GPR162Q16538 588 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 ANXA2RQ3ZCQ2 193 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 ANKRD45Q5TZF3 282 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 ZNF474Q6S9Z5 364 aaPredicted RBP4.13□□□□□ -1.75
VPS13B-207ENST00000518569 NEK8Q86SG6 692 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 HERC6Q8IVU3 1022 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 SMAP1Q8IYB5 467 aaPredicted RBP4.13□□□□□ -1.75
VPS13B-207ENST00000518569 ADGRF3Q8IZF5 1079 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 ENDOVQ8N8Q3 282 aaKnown RBP4.13□□□□□ -1.75
VPS13B-207ENST00000518569 EXD3Q8N9H8 876 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 FSIP1Q8NA03 581 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 ZFPM2Q8WW38 1151 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 PIGKQ92643 395 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 TM2D2Q9BX73 214 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 PDE11AQ9HCR9 933 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 ADARB2Q9NS39 739 aaKnown RBP4.13□□□□□ -1.75
VPS13B-207ENST00000518569 PI4KBQ9UBF8 816 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 KCND3Q9UK17 655 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 FEM1BQ9UK73 627 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 FRMD4BQ9Y2L6 1034 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 SMIM35A0A1B0GVV1 85 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 AGAP5A6NIR3 686 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 SAC3D1A6NKF1 404 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 B9A039 149 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 MASP2O00187 686 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 CYP21A2P08686 494 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 ALDOCP09972 364 aaKnown RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 CHN1P15882 459 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 TFEBP19484 476 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 EPHB2P29323 1055 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 MPGP29372 298 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 HOXA7P31268 230 aaPredicted RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 PPM1FP49593 454 aaPredicted RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 PAPOLAP51003 745 aaKnown RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 ADPRHP54922 357 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 GHRHRQ02643 423 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 CFHR1Q03591 330 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 SRSF4Q08170 494 aaKnown RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 MTA1Q13330 715 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 BIRC3Q13489 604 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 EARS2Q5JPH6 523 aaKnown RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 SLC18B1Q6NT16 456 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 DHRS13Q6UX07 377 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 DEF8Q6ZN54 512 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 ZNF354CQ86Y25 554 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 RHPN2Q8IUC4 686 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 SUGP1Q8IWZ8 645 aaKnown RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 CPXCR1Q8N123 301 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 PAQR4Q8N4S7 273 aaPredicted RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 TMEM57Q8N5G2 664 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 FAM47BQ8NA70 645 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 OR52N4Q8NGI2 321 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 CSGALNACT1Q8TDX6 532 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 CLEC4CQ8WTT0 213 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 AFG1LQ8WV93 481 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 GOLGA1Q92805 767 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 KAT2BQ92831 832 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 ATP2A3Q93084 1043 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 KTI12Q96EK9 354 aaPredicted RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 ZSCAN31Q96LW9 406 aaPredicted RBP4.12□□□□□ -1.75
VPS13B-207ENST00000518569 ABHD14AQ9BUJ0 271 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 MLXIPLQ9NP71 852 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 PDGFCQ9NRA1 345 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 SLC22A11Q9NSA0 550 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 DERAQ9Y315 318 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 KAT6AQ92794 2004 aa4.12□□□□□ -1.75
VPS13B-207ENST00000518569 LMTK3Q96Q04 1460 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 KRT38O76015 456 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 ATP5F1P24539 256 aaPredicted RBP4.11□□□□□ -1.75
VPS13B-207ENST00000518569 LMO1P25800 156 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 RBM5P52756 815 aaKnown RBP eCLIP4.11□□□□□ -1.75
VPS13B-207ENST00000518569 RPS13P62277 151 aaKnown RBP4.11□□□□□ -1.75
VPS13B-207ENST00000518569 YPEL5P62699 121 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 SSBP2P81877 361 aaPredicted RBP4.11□□□□□ -1.75
VPS13B-207ENST00000518569 SHC2P98077 582 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 CCDC142Q17RM4 750 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 COLEC12Q5KU26 742 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 SYT13Q7L8C5 426 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 USP38Q8NB14 1042 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 PPM1EQ8WY54 764 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 ARRDC3Q96B67 414 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 PYM1Q9BRP8 204 aaKnown RBP4.11□□□□□ -1.75
VPS13B-207ENST00000518569 PRSS22Q9GZN4 317 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 CHODLQ9H9P2 273 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 NOD2Q9HC29 1040 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 TXNRD2Q9NNW7 524 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 MTMR4Q9NYA4 1195 aa4.11□□□□□ -1.75
VPS13B-207ENST00000518569 KCNJ18B7U540 433 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 MCIDASD6RGH6 385 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 E5RJQ4 531 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 TP73O15350 636 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 PRR35P0CG20 571 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 PEPDP12955 493 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 TNNT1P13805 278 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms