RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 POU6F1Q14863 301 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 PDPK2PQ6A1A2 396 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 CGB2Q6NT52 195 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 KIAA0319LQ8IZA0 1049 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 RBM15BQ8NDT2 890 aaKnown RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 OR5B17Q8NGF7 314 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 NR1H4Q96RI1 486 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 ST6GALNAC4Q9H4F1 302 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 TAS2R1Q9NYW7 299 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 A0A0B4J269 797 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 NCF1BA6NI72 391 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 NCF1CA8MVU1 366 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 TBX10O75333 385 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 NCF1P14598 390 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 RAG1P15918 1043 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 STMN1P16949 149 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 IVDP26440 423 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 SLC11A2P49281 568 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 NUDT2P50583 147 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 TBL3Q12788 808 aaKnown RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 MOGSQ13724 837 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 TMEM132BQ14DG7 1078 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 SKIV2LQ15477 1246 aaKnown RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 PRAMEF19Q5SWL8 479 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 OVOS1Q6IE37 1185 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 CATSPERGQ6ZRH7 1159 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 BBS12Q6ZW61 710 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 TLK2Q86UE8 772 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 JADE3Q92613 823 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 NKD2Q969F2 451 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 GORASP1Q9BQQ3 440 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 CINPQ9BW66 212 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 COLEC11Q9BWP8 271 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 SSU72Q9NP77 194 aaKnown RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 SNX5Q9Y5X3 404 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 CNTNAP2Q9UHC6 1331 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 USP12O75317 370 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 LYPLA2O95372 231 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 PROCP04070 461 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 MMP8P22894 467 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 DNAJB2P25686 324 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 IFNA8P32881 189 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 SLC1A6P48664 564 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 PPP1R15BQ5SWA1 713 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 N4BP2L1Q5TBK1 243 aaPredicted RBP11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 BANPQ8N9N5 519 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 HERPUD2Q9BSE4 406 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 RBM22Q9NW64 420 aaKnown RBP eCLIP11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 NSMCE4AQ9NXX6 385 aa11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 RUVBL2Q9Y230 463 aaKnown RBP11.08□□□□□ -0.63
PCDHGA1-202ENST00000517417 UMODL1Q5DID0 1318 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 PRR5-ARHGAP8B1AHC4 643 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 E9PBE3 544 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 PMM2O15305 246 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 ZSCAN9O15535 394 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 KLHL41O60662 606 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 FAM155BO75949 473 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 LGALS2P05162 132 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 CFHP08603 1231 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 TCF4P15884 667 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 LHX1P48742 406 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 ARHGAP8P85298 464 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 FLOT2Q14254 428 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 KRT72Q14CN4 511 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 C15orf59Q2T9L4 293 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 SYTL3Q4VX76 610 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 DEFB106AQ8N104 65 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 GAD1Q99259 594 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 NT5MQ9NPB1 228 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 RHBDL2Q9NX52 303 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 LGR5O75473 907 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 RECQL4O94761 1208 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 SERPINB5P36952 375 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 TNFSF9P41273 254 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 CDKN2BP42772 138 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 RGS4P49798 205 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 GEMP55040 296 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 C16orf46Q6P387 395 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 C16orf89Q6UX73 402 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 CCNJLQ8IV13 435 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 ENDOVQ8N8Q3 282 aaKnown RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 OR6Y1Q8NGX8 325 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 MPP4Q96JB8 637 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 NAT9Q9BTE0 207 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 KIF17Q9P2E2 1029 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 CRLS1Q9UJA2 301 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 SYNPO2Q9UMS6 1093 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 AAR2Q9Y312 384 aaKnown RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 GOLGA8TH3BQL2 631 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 LYNP07948 512 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 ZBTB48P10074 688 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 EIF4BP23588 611 aaKnown RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 ABL2P42684 1182 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 MARK2Q7KZI7 788 aaKnown RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 DEFB128Q7Z7B8 93 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 DHDDSQ86SQ9 333 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 PCYOX1LQ8NBM8 494 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 GSTCDQ8NEC7 633 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms