RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NLRX1Q86UT6 975 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 FCHSD1Q86WN1 690 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 GAS2L3Q86XJ1 694 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TEX2Q8IWB9 1127 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ZZZ3Q8IYH5 903 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CPSF7Q8N684 471 aaKnown RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 NAT16Q8N8M0 369 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TERB1Q8NA31 727 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 NCOA7Q8NI08 942 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 MRAPQ8TCY5 172 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CA5BP1Q8WTZ4 195 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF592Q92610 1267 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 GCDHQ92947 438 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 SERAC1Q96JX3 654 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 NAP1L5Q96NT1 182 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CPVLQ9H3G5 476 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 JPH1Q9HDC5 661 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 DDX43Q9NXZ2 648 aaKnown RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 NCKIPSDQ9NZQ3 722 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 LPAR3Q9UBY5 353 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 PRDM4Q9UKN5 801 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 INTS6Q9UL03 887 aaKnown RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 KIAA1024Q9UPX6 916 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 GIT1Q9Y2X7 761 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 HES2Q9Y543 173 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 MDC1Q14676 2089 aaKnown RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 NEDD4P46934 1319 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 PLXNB1O43157 2135 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 MYH6P13533 1939 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 IGKV6D-21A0A0A0MT36 114 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 A0A1W2PQM1 296 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 ERICH2A1L162 156 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 NEMP2A6NFY4 417 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 FAM47DPA6NHR8 397 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 E7EWF7 191 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 GFRA2O00451 464 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 TRIM24O15164 1050 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 RANBP6O60518 1105 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 SMPD2O60906 423 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CEACAM4O75871 244 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 RPLP0P05388 317 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 TPM2P07951 284 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CALM1P0DP23 149 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CALM2P0DP24 149 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CALM3P0DP25 149 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 SNHG28P0DPA3 235 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 FGF3P11487 239 aaPredicted RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 MUTP22033 750 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 PSMA5P28066 241 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 NMT1P30419 496 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 MCM5P33992 734 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 HSPA4P34932 840 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 SOX5P35711 763 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 LIFRP42702 1097 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CCL7P80098 99 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CTDSPL2Q05D32 466 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 ZFP36L1Q07352 338 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 C16orf72Q14CZ0 275 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 QRICH1Q2TAL8 776 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 EFHC2Q5JST6 749 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 GPATCH4Q5T3I0 446 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CREB3L3Q68CJ9 461 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 KIAA0930Q6ICG6 404 aaPredicted RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 NAPEPLDQ6IQ20 393 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CD300LGQ6UXG3 332 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 NUDT18Q6ZVK8 323 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 DHX32Q7L7V1 743 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 RALYLQ86SE5 291 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 TMEM150AQ86TG1 271 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 SAMD3Q8N6K7 520 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 TMEM145Q8NBT3 493 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 BEST2Q8NFU1 509 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 PCDH19Q8TAB3 1148 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 SH3RF2Q8TEC5 729 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 NAT6Q93015 286 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 GPRASP2Q96D09 838 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CDHR1Q96JP9 859 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 PPP1R9BQ96SB3 815 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 TBX15Q96SF7 602 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 ZSCAN10Q96SZ4 725 aaPredicted RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 FDXACB1Q9BRP7 624 aaPredicted RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 UBAC1Q9BSL1 405 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF747Q9BV97 191 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 EIF2AQ9BY44 585 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CPEB1Q9BZB8 566 aaKnown RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 TM6SF1Q9BZW5 370 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 INO80BQ9C086 356 aaPredicted RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 UBA5Q9GZZ9 404 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 SHARPINQ9H0F6 387 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 ING2Q9H160 280 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 IL25Q9H293 177 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CRISPLD1Q9H336 500 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 GRPEL1Q9HAV7 217 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 SLC24A3Q9HC58 644 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 GPAMQ9HCL2 828 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 CHMP5Q9NZZ3 219 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 ZSWIM5Q9P217 1185 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 SLC9A2Q9UBY0 812 aa3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 DAXXQ9UER7 740 aaPredicted RBP3.37□□□□□ -1.87
SCARNA13-201ENST00000516672 KLHL21Q9UJP4 597 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms