RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 CSKP41240 450 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 SLC6A3Q01959 620 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 UAP1L1Q3KQV9 507 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 WDR45BQ5MNZ6 344 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 N4BP2L1Q5TBK1 243 aaPredicted RBP20.23■□□□□ 0.83
DDR1-280ENST00000515881 CDKAL1Q5VV42 579 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 PSAPL1Q6NUJ1 521 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 MMS22LQ6ZRQ5 1243 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 TMEM35BQ8NCS4 154 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 CADM4Q8NFZ8 388 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 PRMT1Q99873 361 aaKnown RBP20.23■□□□□ 0.83
DDR1-280ENST00000515881 NUP58Q9BVL2 599 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 PDCL3Q9H2J4 239 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 FSCN3Q9NQT6 498 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 COX16Q9P0S2 106 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 SUSD2Q9UGT4 822 aa20.23■□□□□ 0.83
DDR1-280ENST00000515881 NUP205Q92621 2012 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 MEI4A8MW99 385 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 H0Y626 953 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 CDH5P33151 784 aaPredicted RBP20.22■□□□□ 0.83
DDR1-280ENST00000515881 NOVA1P51513 510 aaKnown RBP20.22■□□□□ 0.83
DDR1-280ENST00000515881 ST8SIA6P61647 398 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 PITRM1Q5JRX3 1037 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 ZDHHC17Q8IUH5 632 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 ZNF397Q8NF99 534 aaPredicted RBP20.22■□□□□ 0.83
DDR1-280ENST00000515881 RNF34Q969K3 372 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 MYO19Q96H55 970 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 STK33Q9BYT3 514 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 KIAA1522Q9P206 1035 aaPredicted RBP20.22■□□□□ 0.83
DDR1-280ENST00000515881 SUN2Q9UH99 717 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 SPTBN2O15020 2390 aa20.22■□□□□ 0.83
DDR1-280ENST00000515881 F8VZ95 297 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 MAOBP27338 520 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 ATXN3P54252 364 aaPredicted RBP20.21■□□□□ 0.83
DDR1-280ENST00000515881 RPS14P62263 151 aaKnown RBP20.21■□□□□ 0.83
DDR1-280ENST00000515881 ZBTB16Q05516 673 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 NME3Q13232 169 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 MTA1Q13330 715 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 SH3PXD2AQ5TCZ1 1133 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 TTC39BQ5VTQ0 682 aaPredicted RBP20.21■□□□□ 0.83
DDR1-280ENST00000515881 FAM124AQ86V42 546 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 KDM1BQ8NB78 822 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 DNASE2BQ8WZ79 361 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 MRGPRX3Q96LB0 322 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 GTPBP2Q9BX10 602 aaKnown RBP20.21■□□□□ 0.83
DDR1-280ENST00000515881 MTG2Q9H4K7 406 aa20.21■□□□□ 0.83
DDR1-280ENST00000515881 METTL12A8MUP2 240 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 ARHGAP33O14559 1287 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 MOCS3O95396 460 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 GNSP15586 552 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 CSRP1P21291 193 aaKnown RBP20.2■□□□□ 0.82
DDR1-280ENST00000515881 NOS2P35228 1153 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 MATKP42679 507 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 KRT31Q15323 416 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 HNRNPA1L2Q32P51 320 aaKnown RBP20.2■□□□□ 0.82
DDR1-280ENST00000515881 PLEKHG6Q3KR16 790 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 RABGAP1LQ5R372 815 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 TAF3Q5VWG9 929 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 NOP9Q86U38 636 aaKnown RBP20.2■□□□□ 0.82
DDR1-280ENST00000515881 PCED1AQ9H1Q7 454 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 VPS16Q9H269 839 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 GANQ9H2C0 597 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 ERVW-1Q9UQF0 538 aa20.2■□□□□ 0.82
DDR1-280ENST00000515881 CKAP5Q14008 2032 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 GOLGA6L22H0YM25 854 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 M0QYT0 321 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 GIPC1O14908 333 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 LSM8O95777 96 aaKnown RBP20.19■□□□□ 0.82
DDR1-280ENST00000515881 DNTTP04053 509 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 TPM2P07951 284 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 SRPRAP08240 638 aaKnown RBP20.19■□□□□ 0.82
DDR1-280ENST00000515881 SYPP08247 313 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 PMLP29590 882 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 CTSOP43234 321 aaPredicted RBP20.19■□□□□ 0.82
DDR1-280ENST00000515881 GABRB2P47870 512 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 ARID5BQ14865 1188 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 DCAF12L1Q5VU92 463 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 OTUD1Q5VV17 481 aaPredicted RBP20.19■□□□□ 0.82
DDR1-280ENST00000515881 ZNF776Q68DI1 518 aaPredicted RBP20.19■□□□□ 0.82
DDR1-280ENST00000515881 FBXL22Q6P050 247 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 CIR1Q86X95 450 aaPredicted RBP20.19■□□□□ 0.82
DDR1-280ENST00000515881 APCDD1Q8J025 514 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 CCAR2Q8N163 923 aaKnown RBP20.19■□□□□ 0.82
DDR1-280ENST00000515881 C18orf8Q96DM3 657 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 RSPH9Q9H1X1 276 aaPredicted RBP20.19■□□□□ 0.82
DDR1-280ENST00000515881 FANCLQ9NW38 375 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 RRN3Q9NYV6 651 aa20.19■□□□□ 0.82
DDR1-280ENST00000515881 A0A1B0GVM2 712 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 TCAF2A6NFQ2 919 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 SIN3BO75182 1162 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 CEACAM1P13688 526 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 SCNN1AP37088 669 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 KLK7P49862 253 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 RNASE9P60153 205 aaKnown RBP20.18■□□□□ 0.82
DDR1-280ENST00000515881 ECT2LQ008S8 904 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 SLC12A1Q13621 1099 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 AUHQ13825 339 aaKnown RBP20.18■□□□□ 0.82
DDR1-280ENST00000515881 TTC31Q49AM3 519 aaPredicted RBP20.18■□□□□ 0.82
DDR1-280ENST00000515881 FKBP15Q5T1M5 1219 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 SASS6Q6UVJ0 657 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms