RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 IL6STP40189 918 aaPredicted RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 SOX2P48431 317 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 TRAPPC10P48553 1259 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 ALDH18A1P54886 795 aaKnown RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 YPEL5P62699 121 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 TLE3Q04726 772 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 CHAF1AQ13111 956 aaPredicted RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 GAB1Q13480 694 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 BFSP2Q13515 415 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 PTK2BQ14289 1009 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 STARD3Q14849 445 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 MAPRE1Q15691 268 aaKnown RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 SLC9C1Q4G0N8 1177 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 ALFQ53S48 1182 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 CCDC70Q6NSX1 233 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 C1orf228Q6PIY5 440 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 ZNF474Q6S9Z5 364 aaPredicted RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 C16orf89Q6UX73 402 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 KYAT3Q6YP21 454 aaKnown RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 NRSN1Q8IZ57 195 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 TEX19Q8NA77 164 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 MPLKIPQ8TAP9 179 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 IPO4Q8TEX9 1081 aaKnown RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 WDR60Q8WVS4 1066 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 EIF3CQ99613 913 aaKnown RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 TM2D2Q9BX73 214 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 WDR12Q9GZL7 423 aaKnown RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 MLXIPLQ9NP71 852 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 POT1Q9NUX5 634 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 ARL8BQ9NVJ2 186 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 ASNSD1Q9NWL6 643 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 LUZP4Q9P127 313 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 HEY2Q9UBP5 337 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 SWAP70Q9UH65 585 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 GTF2A1LQ9UNN4 478 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 PROCRQ9UNN8 238 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 EMSYQ7Z589 1322 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 ZNF335Q9H4Z2 1342 aaPredicted RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 C3orf70A6NLC5 250 aaPredicted RBP3.66□□□□□ -1.82
HERC4-215ENST00000515753 C2CD4BA6NLJ0 364 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 FFAR2O15552 330 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 OAZ2O95190 189 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 CD63P08962 238 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 STAT6P42226 847 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 HALP42357 657 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 PPM1FP49593 454 aaPredicted RBP3.66□□□□□ -1.82
HERC4-215ENST00000515753 TNFAIP2Q03169 654 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 ERV3-1Q14264 604 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 SPARCL1Q14515 664 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 SEMA3AQ14563 771 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 ELF2Q15723 593 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 AAK1Q2M2I8 961 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 EARS2Q5JPH6 523 aaKnown RBP3.66□□□□□ -1.82
HERC4-215ENST00000515753 DLK2Q6UY11 383 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 C9orf47Q6ZRZ4 202 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 KRT27Q7Z3Y8 459 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 MYLK4Q86YV6 388 aaPredicted RBP3.66□□□□□ -1.82
HERC4-215ENST00000515753 UEVLDQ8IX04 471 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 RBMXL3Q8N7X1 1067 aaKnown RBP3.66□□□□□ -1.82
HERC4-215ENST00000515753 ADPRHL1Q8NDY3 354 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 VPS37AQ8NEZ2 397 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 SLC22A17Q8WUG5 538 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 CELF1Q92879 486 aaKnown RBP3.66□□□□□ -1.82
HERC4-215ENST00000515753 MUL1Q969V5 352 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 ZFYVE19Q96K21 471 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 SCLT1Q96NL6 688 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 HIPK2Q9H2X6 1198 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 ZBTB1Q9Y2K1 713 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 IFT140Q96RY7 1462 aa3.66□□□□□ -1.82
HERC4-215ENST00000515753 RSF1Q96T23 1441 aaPredicted RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 GTPBP1O00178 669 aaKnown RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 TLX3O43711 291 aaPredicted RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 PPP6R2O75170 966 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 SKAP2O75563 359 aaPredicted RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 ENO1P06733 434 aaKnown RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 HSP90AA1P07900 732 aaKnown RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 CYP3A4P08684 503 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 ALADP13716 330 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 MAN1A1P33908 653 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 CCT5P48643 541 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 POLE2P56282 527 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 B4GALNT1Q00973 533 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 GRM4Q14833 912 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 WDR78Q5VTH9 848 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 WDR93Q6P2C0 686 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 RINLQ6ZS11 566 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 ZNF354CQ86Y25 554 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.65□□□□□ -1.83
HERC4-215ENST00000515753 OR52N4Q8NGI2 321 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 TRMT61AQ96FX7 289 aaKnown RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 LYZL4Q96KX0 146 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 CAMK1GQ96NX5 476 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 PRPF18Q99633 342 aaKnown RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 NPAS1Q99742 590 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 TRMOQ9BU70 441 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 ELOVL1Q9BW60 279 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 KATNAL1Q9BW62 490 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 MLXIPQ9HAP2 919 aa3.65□□□□□ -1.83
HERC4-215ENST00000515753 PAPOLBQ9NRJ5 636 aaKnown RBP3.65□□□□□ -1.83
HERC4-215ENST00000515753 FBXO9Q9UK97 447 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms