RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CD19P15391 556 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 CMA1P23946 247 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 SLC6A4P31645 630 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 EIF2S3P41091 472 aaKnown RBP16.36■□□□□ 0.21
LMNA-223ENST00000515459 DAOAP59103 153 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 SEMG2Q02383 582 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 DNAJC3Q13217 504 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 CST6Q15828 149 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 FAM133BQ5BKY9 247 aaKnown RBP16.36■□□□□ 0.21
LMNA-223ENST00000515459 MSANTD2Q6P1R3 559 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 DHX40Q8IX18 779 aaKnown RBP16.36■□□□□ 0.21
LMNA-223ENST00000515459 OR2T34Q8NGX1 318 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 FIBINQ8TAL6 211 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 UBA3Q8TBC4 463 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 SAP25Q8TEE9 199 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 TTC17Q96AE7 1141 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 NEUROG2Q9H2A3 272 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 GDF3Q9NR23 364 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 STIM2Q9P246 746 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 ADAMTS1Q9UHI8 967 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 FZD4Q9ULV1 537 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 AK5Q9Y6K8 562 aa16.36■□□□□ 0.21
LMNA-223ENST00000515459 GOLGA6L7A0A1B0GV03 622 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 TYW5A2RUC4 315 aaKnown RBP16.35■□□□□ 0.21
LMNA-223ENST00000515459 RRP8O43159 456 aaKnown RBP16.35■□□□□ 0.21
LMNA-223ENST00000515459 ACSL4O60488 711 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 RNASEH2AO75792 299 aaKnown RBP16.35■□□□□ 0.21
LMNA-223ENST00000515459 ZIC2O95409 532 aaPredicted RBP16.35■□□□□ 0.21
LMNA-223ENST00000515459 PRB1P04280 392 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 SETSIPP0DME0 302 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 LCP1P13796 627 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 ARRB1P49407 418 aaPredicted RBP16.35■□□□□ 0.21
LMNA-223ENST00000515459 ACADVLP49748 655 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 CLDN6P56747 220 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 YWHAEP62258 255 aaKnown RBP16.35■□□□□ 0.21
LMNA-223ENST00000515459 CUL2Q13617 745 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 ARID5BQ14865 1188 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 SHBQ15464 509 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 EDRF1Q3B7T1 1238 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 ZCWPW2Q504Y3 356 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 MMAAQ8IVH4 418 aaKnown RBP16.35■□□□□ 0.21
LMNA-223ENST00000515459 EID2Q8N6I1 236 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 KDM1BQ8NB78 822 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 HJURPQ8NCD3 748 aaPredicted RBP16.35■□□□□ 0.21
LMNA-223ENST00000515459 SLC39A7Q92504 469 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 AZIN2Q96A70 460 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 LMLNQ96KR4 655 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 PRORYQ9H606 182 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 HPSEQ9Y251 543 aa16.35■□□□□ 0.21
LMNA-223ENST00000515459 TARSL2A2RTX5 802 aaKnown RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 ATXN7O15265 892 aaPredicted RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 TLX3O43711 291 aaPredicted RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 EPB41P11171 864 aaKnown RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 VDRP11473 427 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 EPHA8P29322 1005 aaPredicted RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 SLC8A1P32418 973 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 CSKP41240 450 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 SYKP43405 635 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 CCR5P51681 352 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 TBX4P57082 545 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 DPYDQ12882 1025 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 TARDBPQ13148 414 aaKnown RBP eCLIP16.34■□□□□ 0.21
LMNA-223ENST00000515459 KCNJ12Q14500 433 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 RTP5Q14D33 572 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 SLC45A4Q5BKX6 768 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 C9orf64Q5T6V5 341 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 HES3Q5TGS1 186 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 FBXL19Q6PCT2 694 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 CCDC117Q8IWD4 279 aaPredicted RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 EEF2KMTQ96G04 330 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 MRGPRX3Q96LB0 322 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 DDX50Q9BQ39 737 aaKnown RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 NRSN2Q9GZP1 204 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 INTS6Q9UL03 887 aaKnown RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 KIAA1257Q9ULG3 409 aa16.34■□□□□ 0.21
LMNA-223ENST00000515459 TPX2Q9ULW0 747 aaKnown RBP16.34■□□□□ 0.21
LMNA-223ENST00000515459 A0A1W2PR77 199 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 O00370 1275 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 HSP90AA1P07900 732 aaKnown RBP16.33■□□□□ 0.2
LMNA-223ENST00000515459 SRPRAP08240 638 aaKnown RBP16.33■□□□□ 0.2
LMNA-223ENST00000515459 CDH18Q13634 790 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 PKDCCQ504Y2 493 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 NADSYN1Q6IA69 706 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 SND1Q7KZF4 910 aaKnown RBP eCLIP16.33■□□□□ 0.2
LMNA-223ENST00000515459 CARNMT1Q8N4J0 409 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 LSM14AQ8ND56 463 aaKnown RBP16.33■□□□□ 0.2
LMNA-223ENST00000515459 IRGQQ8WZA9 623 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 BAP1Q92560 729 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 TSC1Q92574 1164 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 SERAC1Q96JX3 654 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 PRICKLE1Q96MT3 831 aaPredicted RBP16.33■□□□□ 0.2
LMNA-223ENST00000515459 FCRL3Q96P31 734 aaPredicted RBP16.33■□□□□ 0.2
LMNA-223ENST00000515459 ERVW-1Q9UQF0 538 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 COQ4Q9Y3A0 265 aa16.33■□□□□ 0.2
LMNA-223ENST00000515459 HELZ2Q9BYK8 2649 aaKnown RBP16.32■□□□□ 0.2
LMNA-223ENST00000515459 EDDM13A0A1B0GTR0 161 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 TTC34A8MYJ7 566 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 C10orf142B7Z368 130 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms