RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PCDHB18PQ96TA0 734 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 TBCBQ99426 244 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 C11orf70Q9BRQ4 267 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 NUP58Q9BVL2 599 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 DUSP15Q9H1R2 295 aaPredicted RBP13.21□□□□□ -0.29
CLCN3-210ENST00000515420 FBRSQ9HAH7 460 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 METTL5Q9NRN9 209 aaKnown RBP13.21□□□□□ -0.29
CLCN3-210ENST00000515420 ADAM22Q9P0K1 906 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 COX16Q9P0S2 106 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 PLA2G4CQ9UP65 541 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 NUP205Q92621 2012 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 DOCK4Q8N1I0 1966 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 ABCA7Q8IZY2 2146 aa13.21□□□□□ -0.3
CLCN3-210ENST00000515420 A0A1W2PQJ5 194 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 LRRC53A6NM62 1247 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 H0Y626 953 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 PAGE1O75459 146 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 NDUFV2P19404 249 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 CD70P32970 193 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
CLCN3-210ENST00000515420 PBX1P40424 430 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 WASP42768 502 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 PTPN9P43378 593 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 UBASH3AP57075 661 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 LMAN2Q12907 356 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 AUHQ13825 339 aaKnown RBP13.2□□□□□ -0.3
CLCN3-210ENST00000515420 LPAL2Q16609 132 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 FUT11Q495W5 492 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 C2CD6Q53TS8 623 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 TRNP1Q6NT89 227 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 KIAA1211LQ6NV74 962 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 FBXL22Q6P050 247 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 SERPINA13PQ6UXR4 307 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 CARNMT1Q8N4J0 409 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 DCLK2Q8N568 766 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 VCPIP1Q96JH7 1222 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 C1orf74Q96LT6 269 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 PPP1R9BQ96SB3 815 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 TKTL2Q9H0I9 626 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 TMEM245Q9H330 911 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 KIAA1522Q9P206 1035 aaPredicted RBP13.2□□□□□ -0.3
CLCN3-210ENST00000515420 STIM2Q9P246 746 aa13.2□□□□□ -0.3
CLCN3-210ENST00000515420 CEP192Q8TEP8 1941 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 SDK1Q7Z5N4 2213 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 TNRC6BQ9UPQ9 1833 aaKnown RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 C2CD4BA6NLJ0 364 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 WASH3PC4AMC7 463 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 SYNCRIPO60506 623 aaKnown RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 CLDN11O75508 207 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 TPM3P06753 285 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 KRT3P12035 628 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 TGM1P22735 817 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 SDC4P31431 198 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 DPP6P42658 865 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 PLK1P53350 603 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 CAMK2GQ13555 558 aaPredicted RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 ASIC2Q16515 512 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 CSRP2Q16527 193 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 PTPRNQ16849 979 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 MAP7D1Q3KQU3 841 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 SFMBT2Q5VUG0 894 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 SLC36A4Q6YBV0 504 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 CCAR2Q8N163 923 aaKnown RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 CFAP52Q8N1V2 620 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 PGBD3Q8N328 593 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 SYN2Q92777 582 aaPredicted RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 MRGPRX1Q96LB2 322 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 CFAP57Q96MR6 1250 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 RPRD1AQ96P16 312 aaPredicted RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 HAPLN3Q96S86 360 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 SEPT11Q9NVA2 429 aaKnown RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 INTS6Q9UL03 887 aaKnown RBP13.19□□□□□ -0.3
CLCN3-210ENST00000515420 HS3ST4Q9Y661 456 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 DMXL1Q9Y485 3027 aa13.19□□□□□ -0.3
CLCN3-210ENST00000515420 ITIH6Q6UXX5 1313 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 IGLV3-10A0A075B6K4 115 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 TCRBV5S1A1TA0A578 114 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 SIGLEC16A6NMB1 481 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 DCLK1O15075 740 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 ADCY5O95622 1261 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 EPHX1P07099 455 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 SRPRAP08240 638 aaKnown RBP13.18□□□□□ -0.3
CLCN3-210ENST00000515420 GZMAP12544 262 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 PDGFRAP16234 1089 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 TNFAIP3P21580 790 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 PRKCHP24723 683 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 CSKP41240 450 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
CLCN3-210ENST00000515420 CDH4P55283 916 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 ST8SIA6P61647 398 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 LMNB2Q03252 620 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 SULT2A1Q06520 285 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 FSCBQ5H9T9 825 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms