RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 HCN2Q9UL51 889 aa12.9□□□□□ -0.34
PTCD2-210ENST00000515198 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
PTCD2-210ENST00000515198 PLA2G4CQ9UP65 541 aa12.9□□□□□ -0.34
PTCD2-210ENST00000515198 HS3ST4Q9Y661 456 aa12.9□□□□□ -0.34
PTCD2-210ENST00000515198 CACNA1HO95180 2353 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 EML5Q05BV3 1969 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 WDFY4Q6ZS81 3184 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 TCRBV21S2A2A0A5A6 115 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 DDX3XO00571 662 aaKnown RBP eCLIP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 RTN2O75298 545 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 RPP40O75818 363 aaKnown RBP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 ENDOD1O94919 500 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 MOCS3O95396 460 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 GJB6O95452 261 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 ATP5BP06576 529 aaKnown RBP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 RRM1P23921 792 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 CD70P32970 193 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 OXCT1P55809 520 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 LMAN2Q12907 356 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 AUHQ13825 339 aaKnown RBP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 SIM2Q14190 667 aaPredicted RBP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 ZNF234Q14588 700 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 STARD3Q14849 445 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 C15orf59Q2T9L4 293 aaPredicted RBP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 CCDC14Q49A88 953 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 HGSNATQ68CP4 663 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 MBLAC2Q68D91 279 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 WDR59Q6PJI9 974 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 LRRC31Q6UY01 552 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 PRR23BQ6ZRT6 265 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 ASCL5Q7RTU5 278 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 FAM131BQ86XD5 332 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 CCAR2Q8N163 923 aaKnown RBP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 OLIG1Q8TAK6 271 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 HMGB4Q8WW32 186 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 GAB3Q8WWW8 586 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 TRIM11Q96F44 468 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 C1orf74Q96LT6 269 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 MCEEQ96PE7 176 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 HAPLN3Q96S86 360 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 GABRG3Q99928 467 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 PARVAQ9NVD7 372 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 KIAA1522Q9P206 1035 aaPredicted RBP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 SMG5Q9UPR3 1016 aaKnown RBP12.89□□□□□ -0.35
PTCD2-210ENST00000515198 STON1Q9Y6Q2 735 aa12.89□□□□□ -0.35
PTCD2-210ENST00000515198 TCRBV5S1A1TA0A578 114 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 HRO43593 1189 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
PTCD2-210ENST00000515198 ASLP04424 464 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 DLDP09622 509 aaKnown RBP12.88□□□□□ -0.35
PTCD2-210ENST00000515198 IL12RB1P42701 662 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 CLCN6P51797 869 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 ATXN1P54253 815 aaKnown RBP12.88□□□□□ -0.35
PTCD2-210ENST00000515198 SRSF5Q13243 272 aaKnown RBP12.88□□□□□ -0.35
PTCD2-210ENST00000515198 SLC12A1Q13621 1099 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 ENPP2Q13822 863 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 TSR1Q2NL82 804 aaKnown RBP12.88□□□□□ -0.35
PTCD2-210ENST00000515198 FUT11Q495W5 492 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 FNDC3BQ53EP0 1204 aaKnown RBP12.88□□□□□ -0.35
PTCD2-210ENST00000515198 USP39Q53GS9 565 aaKnown RBP12.88□□□□□ -0.35
PTCD2-210ENST00000515198 TMEM215Q68D42 235 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 SERPINA13PQ6UXR4 307 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 ADIPOR2Q86V24 386 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 VSTM4Q8IW00 320 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 SUMF1Q8NBK3 374 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 MDGA1Q8NFP4 955 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 FAM172AQ8WUF8 416 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 SORCS1Q8WY21 1168 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 IGSF8Q969P0 613 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 PPP1R9BQ96SB3 815 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 TPSD1Q9BZJ3 242 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 TRIM5Q9C035 493 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 ANLNQ9NQW6 1124 aa12.88□□□□□ -0.35
PTCD2-210ENST00000515198 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.87□□□□□ -0.35
PTCD2-210ENST00000515198 A0A1W2PQF6 199 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 WASH3PC4AMC7 463 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 SYNCRIPO60506 623 aaKnown RBP12.87□□□□□ -0.35
PTCD2-210ENST00000515198 CLDN11O75508 207 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 MYBL1P10243 752 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 GGCXP38435 758 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 ZNF143P52747 638 aaPredicted RBP12.87□□□□□ -0.35
PTCD2-210ENST00000515198 CDH4P55283 916 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 RPL7AP62424 266 aaKnown RBP12.87□□□□□ -0.35
PTCD2-210ENST00000515198 ZNF177Q13360 481 aaPredicted RBP12.87□□□□□ -0.35
PTCD2-210ENST00000515198 MAMLD1Q13495 774 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
PTCD2-210ENST00000515198 C5orf22Q49AR2 442 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 FSCBQ5H9T9 825 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 SH3PXD2AQ5TCZ1 1133 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 PLEKHA7Q6IQ23 1121 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 SARM1Q6SZW1 724 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.87□□□□□ -0.35
PTCD2-210ENST00000515198 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 C11orf74Q86VG3 221 aa12.87□□□□□ -0.35
PTCD2-210ENST00000515198 CIR1Q86X95 450 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms