RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ZNF33AQ06730 810 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 MTA1Q13330 715 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 CAMK2GQ13555 558 aaPredicted RBP25.33■■□□□ 1.65
SNF8-213ENST00000514929 FSCBQ5H9T9 825 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 ZNF677Q86XU0 584 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 AOPEPQ8N6M6 819 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 OR2T3Q8NH03 318 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 LMLNQ96KR4 655 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 NAT10Q9H0A0 1025 aaKnown RBP25.33■■□□□ 1.65
SNF8-213ENST00000514929 ITM2CQ9NQX7 267 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 TMEM74BQ9NUR3 256 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 RRN3Q9NYV6 651 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.33■■□□□ 1.65
SNF8-213ENST00000514929 KIAA1522Q9P206 1035 aaPredicted RBP25.33■■□□□ 1.65
SNF8-213ENST00000514929 USP36Q9P275 1121 aaKnown RBP25.33■■□□□ 1.65
SNF8-213ENST00000514929 STAP1Q9ULZ2 295 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 SIK3Q9Y2K2 1263 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 TNRC6BQ9UPQ9 1833 aaKnown RBP25.33■■□□□ 1.64
SNF8-213ENST00000514929 CKAP5Q14008 2032 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 MUC22E2RYF6 1773 aaPredicted RBP25.32■■□□□ 1.64
SNF8-213ENST00000514929 MED19A0JLT2 244 aaPredicted RBP25.32■■□□□ 1.64
SNF8-213ENST00000514929 EPHB6O15197 1021 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 MOCS3O95396 460 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 ASLP04424 464 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 CD6P30203 668 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 SOX5P35711 763 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 CSKP41240 450 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 UBXN1Q04323 297 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 TRIM61Q5EBN2 209 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 RABGAP1LQ5R372 815 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 FAM102AQ5T9C2 384 aaPredicted RBP25.32■■□□□ 1.64
SNF8-213ENST00000514929 NAA35Q5VZE5 725 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 MMS22LQ6ZRQ5 1243 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 XYLT1Q86Y38 959 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 NEK11Q8NG66 645 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 CPA5Q8WXQ8 436 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 TTC17Q96AE7 1141 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 HSPA12BQ96MM6 686 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 PRMT1Q99873 361 aaKnown RBP25.32■■□□□ 1.64
SNF8-213ENST00000514929 NUSAP1Q9BXS6 441 aaKnown RBP25.32■■□□□ 1.64
SNF8-213ENST00000514929 EVLQ9UI08 416 aaPredicted RBP25.32■■□□□ 1.64
SNF8-213ENST00000514929 PILRBQ9UKJ0 227 aa25.32■■□□□ 1.64
SNF8-213ENST00000514929 ZNF18P17022 549 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 HOXD12P35452 270 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 SCNN1AP37088 669 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 STAT1P42224 750 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 SULT1E1P49888 294 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 TPMTP51580 245 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 JAM2P57087 298 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 NOMO3P69849 1222 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 IRX4P78413 519 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 NCAPHQ15003 741 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 C2CD6Q53TS8 623 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 PITRM1Q5JRX3 1037 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 TTC39BQ5VTQ0 682 aaPredicted RBP25.31■■□□□ 1.64
SNF8-213ENST00000514929 SLC41A1Q8IVJ1 513 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 SLC20A1Q8WUM9 679 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 TOE1Q96GM8 510 aaKnown RBP25.31■■□□□ 1.64
SNF8-213ENST00000514929 NPY6RQ99463 290 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 SUN2Q9UH99 717 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 NOCTQ9UK39 431 aaKnown RBP25.31■■□□□ 1.64
SNF8-213ENST00000514929 INTS6Q9UL03 887 aaKnown RBP25.31■■□□□ 1.64
SNF8-213ENST00000514929 CEP192Q8TEP8 1941 aa25.31■■□□□ 1.64
SNF8-213ENST00000514929 GOLGA8SH3BPF8 625 aa25.3■■□□□ 1.64
SNF8-213ENST00000514929 OXTRP30559 389 aa25.3■■□□□ 1.64
SNF8-213ENST00000514929 CDR2Q01850 454 aa25.3■■□□□ 1.64
SNF8-213ENST00000514929 ANO6Q4KMQ2 910 aa25.3■■□□□ 1.64
SNF8-213ENST00000514929 SND1Q7KZF4 910 aaKnown RBP eCLIP25.3■■□□□ 1.64
SNF8-213ENST00000514929 CIR1Q86X95 450 aaPredicted RBP25.3■■□□□ 1.64
SNF8-213ENST00000514929 CCAR2Q8N163 923 aaKnown RBP25.3■■□□□ 1.64
SNF8-213ENST00000514929 RPRD1AQ96P16 312 aaPredicted RBP25.3■■□□□ 1.64
SNF8-213ENST00000514929 FBRSQ9HAH7 460 aa25.3■■□□□ 1.64
SNF8-213ENST00000514929 WSB2Q9NYS7 404 aaPredicted RBP25.3■■□□□ 1.64
SNF8-213ENST00000514929 A0A1B0GVM2 712 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 TCAF2A6NFQ2 919 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 LRRC10BA6NIK2 292 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 CFIP05156 583 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 KCNA4P22459 653 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 SYCP2LQ5T4T6 812 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 OTUD1Q5VV17 481 aaPredicted RBP25.29■■□□□ 1.64
SNF8-213ENST00000514929 PEAR1Q5VY43 1037 aaPredicted RBP25.29■■□□□ 1.64
SNF8-213ENST00000514929 CAVIN1Q6NZI2 390 aaKnown RBP25.29■■□□□ 1.64
SNF8-213ENST00000514929 FBXL22Q6P050 247 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 RGL4Q8IZJ4 473 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 CEP76Q8TAP6 659 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 FOXJ1Q92949 421 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 ZNF419Q96HQ0 510 aaPredicted RBP25.29■■□□□ 1.64
SNF8-213ENST00000514929 GPR174Q9BXC1 333 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 WDCPQ9H6R7 721 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 TMEM9BQ9NQ34 198 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 PRSS16Q9NQE7 514 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 PIGVQ9NUD9 493 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 VANGL2Q9ULK5 521 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 LAMA1P25391 3075 aa25.29■■□□□ 1.64
SNF8-213ENST00000514929 C4orf47A7E2U8 309 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 PAGE1O75459 146 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 F9P00740 461 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 DEUP1Q05D60 604 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 AUHQ13825 339 aaKnown RBP25.28■■□□□ 1.64
SNF8-213ENST00000514929 DUOXA1Q1HG43 343 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms