RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	CHST15	Q7LFX5	561 aa	Predicted RBP	11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	IGFN1	Q86VF2	1251 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	TANK	Q92844	425 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	AKT1S1	Q96B36	256 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	CDH19	Q9H159	772 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	RNPEP	Q9H4A4	650 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	PRM3	Q9NNZ6	103 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	PCDH12	Q9NPG4	1184 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	ACSS2	Q9NR19	701 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	6e-12	■■■■■ 40.3
PDCD6-210	ENST00000513582	BCAP29	Q9UHQ4	241 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	DRG1	Q9Y295	367 aa	Known RBP	11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	SNED1	Q8TER0	1413 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	COL14A1	Q05707	1796 aa	Known RBP	11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	TRIM64C	A6NLI5	447 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	CKMT2	P17540	419 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	IKBKE	Q14164	716 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	NFIL3	Q16649	462 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZNF618	Q5T7W0	954 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	SAMD7	Q7Z3H4	446 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	IQCF2	Q8IXL9	164 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	PCYOX1L	Q8NBM8	494 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	TAAR1	Q96RJ0	339 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	POLR1B	Q9H9Y6	1135 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	AVEN	Q9NQS1	362 aa	Predicted RBP	11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	TBC1D22B	Q9NU19	505 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZNRF3	Q9ULT6	936 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	MAST2	Q6P0Q8	1798 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	CST8	O60676	142 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	MYO1D	O94832	1006 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	CLIC3	O95833	236 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	CHEK2	O96017	543 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	ACAT1	P24752	427 aa	Known RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	GRM5	P41594	1212 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	DNASE1L3	Q13609	305 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	MOG	Q16653	247 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	TFDP3	Q5H9I0	405 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	LGSN	Q5TDP6	509 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	PPP2R2D	Q66LE6	453 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	CARM1	Q86X55	608 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	PDZD8	Q8NEN9	1154 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	RCN3	Q96D15	328 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	RNF19A	Q9NV58	838 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	SLC8A2	Q9UPR5	921 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZHX2	Q9Y6X8	837 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	LAMB2	P55268	1798 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	hCG_1818297	A0A087WSY0	165 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582		A0A087WXM4	84 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	INHBB	P09529	407 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	QARS	P47897	775 aa	Known RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	CASC4	Q6P4E1	433 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	MCF2L2	Q86YR7	1114 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	ADGRF2	Q8IZF7	708 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	SIX6OS1	Q8N1H7	587 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	UBR7	Q8N806	425 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	KY	Q8NBH2	561 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	OSBPL11	Q9BXB4	747 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	PARVB	Q9HBI1	364 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	DKK3	Q9UBP4	350 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	NOL3	O60936	208 aa	Known RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	ATP5B	P06576	529 aa	Known RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	TXNL4A	P83876	142 aa	Known RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	CREB5	Q02930	508 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	RAB39A	Q14964	217 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	SLC9B1	Q4ZJI4	515 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	ANGEL2	Q5VTE6	544 aa	Known RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	USP37	Q86T82	979 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	PPP1R13L	Q8WUF5	828 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	LENG9	Q96B70	501 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	MBOAT7	Q96N66	472 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	RTKN	Q9BST9	563 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	NOL11	Q9H8H0	719 aa	Known RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	SMYD2	Q9NRG4	433 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	ADA2	Q9NZK5	511 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	EXOC7	Q9UPT5	735 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	PRELID1	Q9Y255	219 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	ATP11B	Q9Y2G3	1177 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	AP4S1	Q9Y587	144 aa		11.4	□□□□□ -0.58
PDCD6-210	ENST00000513582	DOT1L	Q8TEK3	1739 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	CCDC162P	A2VCL2	907 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	TMEM114	B3SHH9	223 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582		E7ESA3	106 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	KPNA4	O00629	521 aa	Predicted RBP	11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	GRAP2	O75791	330 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	BMP10	O95393	424 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	APOE	P02649	317 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	CYP3A4	P08684	503 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	CSH1	P0DML2	217 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	CSH2	P0DML3	217 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	RPS6	P62753	249 aa	Known RBP	11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	TUBA4A	P68366	448 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	SLC10A2	Q12908	348 aa	Predicted RBP	11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	KRT39	Q6A163	491 aa		11.39	□□□□□ -0.59
PDCD6-210	ENST00000513582	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms