RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PPP2CAP67775 309 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 OVGP1Q12889 678 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 SLC39A14Q15043 492 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 C9orf64Q5T6V5 341 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 PM20D1Q6GTS8 502 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 SND1Q7KZF4 910 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDX41-216ENST00000513562 PIGZQ86VD9 579 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 IQCHQ86VS3 1027 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 SLC9A9Q8IVB4 645 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 ZNF557Q8N988 423 aaPredicted RBP11.38□□□□□ -0.59
DDX41-216ENST00000513562 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 MRGPRX3Q96LB0 322 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 OMDQ99983 421 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 C7orf25Q9BPX7 421 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
DDX41-216ENST00000513562 POLR1BQ9H9Y6 1135 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 SLC39A2Q9NP94 309 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 ASCL3Q9NQ33 180 aa11.38□□□□□ -0.59
DDX41-216ENST00000513562 OLA1Q9NTK5 396 aaKnown RBP11.38□□□□□ -0.59
DDX41-216ENST00000513562 TARSL2A2RTX5 802 aaKnown RBP11.37□□□□□ -0.59
DDX41-216ENST00000513562 K7ENP7 123 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 IKBKBO14920 756 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 OPA1O60313 960 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 SDC3O75056 442 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 USP12O75317 370 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 ZBED1O96006 694 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 ASLP04424 464 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 GOT1P17174 413 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 CSKP41240 450 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 C1orf220Q5T0J3 134 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 PIK3R6Q5UE93 754 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 INO80CQ6PI98 192 aaPredicted RBP11.37□□□□□ -0.59
DDX41-216ENST00000513562 IGF2-ASQ6U949 168 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 SLC25A45Q8N413 288 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 OR4C6Q8NH72 309 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 OR14C36Q8NHC7 312 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 DHX58Q96C10 678 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 VCPIP1Q96JH7 1222 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 DEPDC7Q96QD5 511 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 USP28Q96RU2 1077 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 IMPG2Q9BZV3 1241 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 DNAI2Q9GZS0 605 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 NIF3L1Q9GZT8 377 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 THSD1Q9NS62 852 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 ARHGAP20Q9P2F6 1191 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 PLXNA2O75051 1894 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 COL12A1Q99715 3063 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 COL6A6A6NMZ7 2263 aa11.37□□□□□ -0.59
DDX41-216ENST00000513562 KNTC1P50748 2209 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.36□□□□□ -0.59
DDX41-216ENST00000513562 A0A1B0GVM2 712 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 IRAK2O43187 625 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 LZTS3O60299 673 aaPredicted RBP11.36□□□□□ -0.59
DDX41-216ENST00000513562 MAGEC1O60732 1142 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 TBL1XO60907 577 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 CSO75390 466 aaKnown RBP11.36□□□□□ -0.59
DDX41-216ENST00000513562 ADH1BP00325 375 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 CKMT1AP12532 417 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 KRT10P13645 584 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 C5AR1P21730 350 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 NUDT1P36639 197 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 PSMD8P48556 350 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 TKTL1P51854 596 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 SKOR1P84550 965 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 DAB2P98082 770 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 KIAA1614Q5VZ46 1190 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 RFWD3Q6PCD5 774 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 PRICKLE2Q7Z3G6 844 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 MFN1Q8IWA4 741 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 IQUBQ8NA54 791 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 FIBINQ8TAL6 211 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 FAM131CQ96AQ9 280 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 FAM129BQ96TA1 746 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.36□□□□□ -0.59
DDX41-216ENST00000513562 ULBP1Q9BZM6 244 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 IL17BQ9UHF5 180 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 SFMBT1Q9UHJ3 866 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 CYTH4Q9UIA0 394 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 INTS6Q9UL03 887 aaKnown RBP11.36□□□□□ -0.59
DDX41-216ENST00000513562 DMTF1Q9Y222 760 aa11.36□□□□□ -0.59
DDX41-216ENST00000513562 ITIH6Q6UXX5 1313 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 EDDM13A0A1B0GTR0 161 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 PVALEFA0A1B0GWK0 134 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 TTC34A8MYJ7 566 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 MSI1O43347 362 aaKnown RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 IGLV3-27P01718 113 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 GP1BAP07359 652 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 SRPRAP08240 638 aaKnown RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 PDCP20941 246 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 DGKAP23743 735 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 MZF1P28698 734 aaPredicted RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 CASP1P29466 404 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 SLC6A4P31645 630 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 DRD3P35462 400 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 NASPP49321 788 aaPredicted RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 ZNF394Q53GI3 561 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 FAM133BQ5BKY9 247 aaKnown RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 ARHGAP17Q68EM7 881 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 PRPF39Q86UA1 669 aaKnown RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 ANKRD52Q8NB46 1076 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms