RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 NR5A2O00482 541 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 KATNA1O75449 491 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 CTNNB1P35222 781 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 SKP1P63208 163 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 BCL2L1Q07817 233 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 PNMA5Q96PV4 448 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.45■□□□□ 0.22
TRIO-221ENST00000513206 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 PDZK1P1A8MUH7 402 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
TRIO-221ENST00000513206 LGI2Q8N0V4 545 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 TDRD5Q8NAT2 981 aaKnown RBP16.45■□□□□ 0.22
TRIO-221ENST00000513206 TATDN2Q93075 761 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 EXOSC4Q9NPD3 245 aaKnown RBP16.45■□□□□ 0.22
TRIO-221ENST00000513206 EVA1BQ9NVM1 165 aa16.45■□□□□ 0.22
TRIO-221ENST00000513206 NR6A1Q15406 480 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 ZFRQ96KR1 1074 aaKnown RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 FHDC1Q9C0D6 1143 aaPredicted RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 MRPL42Q9Y6G3 142 aaKnown RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 TFE3P19532 575 aaPredicted RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 THOP1P52888 689 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 SLC2A14Q8TDB8 520 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 PDCD2LQ9BRP1 358 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 SALL1Q9NSC2 1324 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 CYP2A6P11509 494 aaPredicted RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 PTPN3P26045 913 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 ITGB3BPQ13352 177 aaPredicted RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 ZCCHC8Q6NZY4 707 aaKnown RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 CYP20A1Q6UW02 462 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 CRELD2Q6UXH1 353 aaPredicted RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 CLYBLQ8N0X4 340 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 KLHL4Q9C0H6 718 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 DDX18Q9NVP1 670 aaKnown RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 FAM205AQ6ZU69 1335 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 NALCNQ8IZF0 1738 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 BCL9O00512 1426 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 ITGA9Q13797 1035 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 SYTL1Q8IYJ3 562 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 MAGEC3Q8TD91 643 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 MRPL48Q96GC5 212 aaKnown RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 NFICP08651 508 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 MTTPP55157 894 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 CEP78Q5JTW2 689 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 NIPA1Q7RTP0 329 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 YTHDF3Q7Z739 585 aaKnown RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 GAD1Q99259 594 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 ACOX2Q99424 681 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 OSGEPQ9NPF4 335 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 TMEM114B3SHH9 223 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 RAD51BO15315 384 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 GPRC5DQ9NZD1 345 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 CTNNAL1Q9UBT7 734 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 CD44P16070 742 aaKnown RBP16.44■□□□□ 0.22
TRIO-221ENST00000513206 DOK6Q6PKX4 331 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 ATP13A1Q9HD20 1204 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 ATXN10Q9UBB4 475 aa16.44■□□□□ 0.22
TRIO-221ENST00000513206 FAM86B1E9PN63 330 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 FAM86B2P0C5J1 330 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 OR56A5P0C7T3 313 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 CSHL1Q14406 222 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 C16orf72Q14CZ0 275 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 TKTL2Q9H0I9 626 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 NCKIPSDQ9NZQ3 722 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 CCDC85CA6NKD9 419 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 RBP1P09455 135 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 PYGMP11217 842 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 PSMC3P17980 439 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 XRCC4Q13426 336 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 PKN1Q16512 942 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 RETSATQ6NUM9 610 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 LPCAT1Q8NF37 534 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 PPP1R10Q96QC0 940 aaKnown RBP16.43■□□□□ 0.22
TRIO-221ENST00000513206 DEPDC7Q96QD5 511 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 CEP41Q9BYV8 373 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 RERGLQ9H628 205 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 SH3GLB1Q9Y371 365 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 USP1O94782 785 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 MARSP56192 900 aaKnown RBP16.43■□□□□ 0.22
TRIO-221ENST00000513206 ATP1A4Q13733 1029 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 SUSD6Q92537 303 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRIO-221ENST00000513206 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 SNTNA6NMZ2 147 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 AGRPO00253 132 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 ASNA1O43681 348 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 CCNT2O60583 730 aaKnown RBP16.43■□□□□ 0.22
TRIO-221ENST00000513206 ATP5C1P36542 298 aaKnown RBP16.43■□□□□ 0.22
TRIO-221ENST00000513206 CPA2P48052 419 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 GSTA3Q16772 222 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 CDH24Q86UP0 819 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 ELMO3Q96BJ8 720 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 CAAP1Q9H8G2 361 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 LIN7AO14910 233 aaPredicted RBP16.43■□□□□ 0.22
TRIO-221ENST00000513206 SASH3O75995 380 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 DEFB115Q30KQ5 88 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 B3GNT6Q6ZMB0 384 aa16.43■□□□□ 0.22
TRIO-221ENST00000513206 HAO1Q9UJM8 370 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms