RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 NUP205Q92621 2012 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 MYO10Q9HD67 2058 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 C2CD4DB7Z1M9 353 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 ZNF185O15231 689 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 CEP104O60308 925 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 EPHB2P29323 1055 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 FCHO2Q0JRZ9 810 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 HTR4Q13639 388 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 ZDHHC14Q8IZN3 488 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 ADGRG2Q8IZP9 1017 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 RASGEF1CQ8N431 466 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 PCDH19Q8TAB3 1148 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 DEPDC1BQ8WUY9 529 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 IGSF8Q969P0 613 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 PRICKLE1Q96MT3 831 aaPredicted RBP12.92□□□□□ -0.34
PDPN-210ENST00000513143 RPRD1AQ96P16 312 aaPredicted RBP12.92□□□□□ -0.34
PDPN-210ENST00000513143 PLA2G2FQ9BZM2 168 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 LINC00597Q9H2U6 94 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 RETREG1Q9H6L5 497 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 PRDM16Q9HAZ2 1276 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 ARHGEF4Q9NR80 690 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 THG1LQ9NWX6 298 aaKnown RBP12.92□□□□□ -0.34
PDPN-210ENST00000513143 STIM2Q9P246 746 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 TTC7AQ9ULT0 858 aaPredicted RBP12.92□□□□□ -0.34
PDPN-210ENST00000513143 WNT6Q9Y6F9 365 aa12.92□□□□□ -0.34
PDPN-210ENST00000513143 CHD5Q8TDI0 1954 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 WASH4PA8MWX3 477 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 TRDMT1O14717 391 aaKnown RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 DCLK1O15075 740 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 FGF10O15520 208 aaPredicted RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 DAPK3O43293 454 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 URI1O94763 535 aaPredicted RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 KRT10P13645 584 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 PSMC3P17980 439 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 ERCC2P18074 760 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 AMPD1P23109 780 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 SP100P23497 879 aaPredicted RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 SGSHP51688 502 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 TFF2Q03403 129 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 TFDP2Q14188 446 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 EML3Q32P44 896 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 RABGAP1LQ5R372 815 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 MPP7Q5T2T1 576 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 TTC39BQ5VTQ0 682 aaPredicted RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 KAZNQ674X7 775 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 SLC9A4Q6AI14 798 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 RWDD4Q6NW29 188 aaKnown RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 NLRP14Q86W24 1093 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 SLC13A5Q86YT5 568 aaPredicted RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 CREG2Q8IUH2 290 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 PQLC3Q8N755 202 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 ST13P5Q8NFI4 369 aaPredicted RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 TMA16Q96EY4 203 aaKnown RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 FAM83CQ9BQN1 747 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 HERPUD2Q9BSE4 406 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 RPP25Q9BUL9 199 aaKnown RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 HEMGNQ9BXL5 484 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 MAK16Q9BXY0 300 aaKnown RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 ZYG11BQ9C0D3 744 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 CATSPERBQ9H7T0 1116 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 SPHK2Q9NRA0 654 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 DUS2Q9NX74 493 aaKnown RBP12.91□□□□□ -0.34
PDPN-210ENST00000513143 MPP6Q9NZW5 540 aa12.91□□□□□ -0.34
PDPN-210ENST00000513143 TSPAN3O60637 253 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 CST8O60676 142 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 CNTN5O94779 1100 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 TJP3O95049 919 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 IL9P15248 144 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 RHOQP17081 205 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 TIE1P35590 1138 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 IFNAR2P48551 515 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 IRAK1P51617 712 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
PDPN-210ENST00000513143 CDH4P55283 916 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.34
PDPN-210ENST00000513143 ADCY2Q08462 1091 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 KLF1Q13351 362 aaPredicted RBP12.9□□□□□ -0.34
PDPN-210ENST00000513143 TUBB2AQ13885 445 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 PDGFRLQ15198 375 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 LLGL1Q15334 1064 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 MPPE1Q53F39 396 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 ALFQ53S48 1182 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 BBS12Q6ZW61 710 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 TMEM25Q86YD3 366 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 RFX6Q8HWS3 928 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 CFAP52Q8N1V2 620 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 RTL3Q8N8U3 475 aaKnown RBP12.9□□□□□ -0.34
PDPN-210ENST00000513143 HJURPQ8NCD3 748 aaPredicted RBP12.9□□□□□ -0.34
PDPN-210ENST00000513143 ACTRT1Q8TDG2 376 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 IRF7Q92985 503 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 NXPE3Q969Y0 559 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 MS4A14Q96JA4 679 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 RPGRIP1Q96KN7 1286 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 KXD1Q9BQD3 176 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 TUBB2BQ9BVA1 445 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 ETNK2Q9NVF9 386 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 TMEM248Q9NWD8 314 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms