RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 BECN2A8MW95 431 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 KCNU1A8MYU2 1149 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 F5H5T6 163 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 BCAT2O15382 392 aaPredicted RBP9.51□□□□□ -0.89
YIPF3-216ENST00000512713 TACR2P21452 398 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 NNMTP40261 264 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 CSKP41240 450 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 AFF3P51826 1226 aaKnown RBP9.51□□□□□ -0.89
YIPF3-216ENST00000512713 SIM1P81133 766 aaPredicted RBP9.51□□□□□ -0.89
YIPF3-216ENST00000512713 ECT2LQ008S8 904 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 APBA1Q02410 837 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 FOXC1Q12948 553 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 TAF5Q15542 800 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 DPCR1Q3MIW9 517 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 VWA3BQ502W6 1294 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 CT47A1Q5JQC4 288 aaPredicted RBP9.51□□□□□ -0.89
YIPF3-216ENST00000512713 DCAF12L1Q5VU92 463 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 RAP1GAP2Q684P5 730 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 ZNF776Q68DI1 518 aaPredicted RBP9.51□□□□□ -0.89
YIPF3-216ENST00000512713 IL27RAQ6UWB1 636 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 PASD1Q8IV76 773 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 ZNF366Q8N895 744 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 SNX19Q92543 992 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 SLC2A13Q96QE2 648 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 CPXM1Q96SM3 734 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 BTBD1Q9H0C5 482 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 DNAAF2Q9NVR5 837 aaKnown RBP9.51□□□□□ -0.89
YIPF3-216ENST00000512713 TMEM51Q9NW97 253 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 COX16Q9P0S2 106 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 SCML1Q9UN30 329 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 PCDHGC3Q9UN70 934 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 OBSL1O75147 1896 aa9.51□□□□□ -0.89
YIPF3-216ENST00000512713 FOXN3O00409 490 aaPredicted RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 LUC7L3O95232 432 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 SEMA4FO95754 770 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 TPM2P07951 284 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 SRPRAP08240 638 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 EEF1GP26641 437 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 ACSL1P33121 698 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 RPS14P62263 151 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 NME3Q13232 169 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 SLC12A1Q13621 1099 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 RAPGEF1Q13905 1077 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 KCNJ12Q14500 433 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 ARID5BQ14865 1188 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 TEAD4Q15561 434 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 ST3GAL2Q16842 350 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 HNRNPA1L2Q32P51 320 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 FSCBQ5H9T9 825 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 PITRM1Q5JRX3 1037 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 OR6B2Q6IFH4 312 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 USP30Q70CQ3 517 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 SND1Q7KZF4 910 aaKnown RBP eCLIP9.5□□□□□ -0.896e-12■■□□□ 13.6
YIPF3-216ENST00000512713 PIP4P1Q86T03 277 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 SLC47A2Q86VL8 602 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 ZDHHC17Q8IUH5 632 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 FAM71AQ8IYT1 594 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 DEFB106AQ8N104 65 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 ZCCHC9Q8N567 271 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 WDTC1Q8N5D0 677 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 TMEM35BQ8NCS4 154 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 C1orf131Q8NDD1 294 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 WFDC5Q8TCV5 224 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 RPRD1AQ96P16 312 aaPredicted RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 RSPH9Q9H1X1 276 aaPredicted RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 SGK2Q9HBY8 427 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 RRN3Q9NYV6 651 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 EIF2B4Q9UI10 523 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 XPO7Q9UIA9 1087 aaKnown RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 ERVW-1Q9UQF0 538 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.5□□□□□ -0.89
YIPF3-216ENST00000512713 PAXBP1Q9Y5B6 917 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 GREB1Q4ZG55 1949 aa9.5□□□□□ -0.89
YIPF3-216ENST00000512713 ANAPC1Q9H1A4 1944 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.49□□□□□ -0.89
YIPF3-216ENST00000512713 EDDM13A0A1B0GTR0 161 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 SPAARA0A1B0GVQ0 90 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 TARSL2A2RTX5 802 aaKnown RBP9.49□□□□□ -0.89
YIPF3-216ENST00000512713 GRAP2O75791 330 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 FSBPO95073 299 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 TRIM16O95361 564 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 CER1O95813 267 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 F9P00740 461 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 IGLV3-25P01717 112 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 C7P10643 843 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 CD27P26842 260 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 NOS2P35228 1153 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 MATKP42679 507 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 SLC6A3Q01959 620 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 SULT2A1Q06520 285 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 GRIK2Q13002 908 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 ZNF177Q13360 481 aaPredicted RBP9.49□□□□□ -0.89
YIPF3-216ENST00000512713 HSP90AA4PQ58FG1 418 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 C9orf64Q5T6V5 341 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 OLFML1Q6UWY5 402 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 MMS22LQ6ZRQ5 1243 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 FAM183BPQ6ZVS7 135 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 SLC26A9Q7LBE3 791 aa9.49□□□□□ -0.89
YIPF3-216ENST00000512713 DSG4Q86SJ6 1040 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms