RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 EGFP01133 1207 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 PABPC1P11940 636 aaKnown RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 CDC25BP30305 580 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 NTSR1P30989 418 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 HOXA6P31267 233 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 RFC1P35251 1148 aaPredicted RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 EIF4A3P38919 411 aaKnown RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 SLC6A11P48066 632 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 ADKP55263 362 aaKnown RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 CDH4P55283 916 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 SEC13P55735 322 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 MTAPQ13126 283 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 MAMLD1Q13495 774 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 AUHQ13825 339 aaKnown RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 ARID5BQ14865 1188 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 FNDC3BQ53EP0 1204 aaKnown RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 C2CD6Q53TS8 623 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 C2orf27AQ580R0 203 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 FYB2Q5VWT5 728 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 PLEKHA7Q6IQ23 1121 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 RFWD3Q6PCD5 774 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 WDR59Q6PJI9 974 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 CHST9Q7L1S5 443 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 PHLDB2Q86SQ0 1253 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 PSTKQ8IV42 348 aaKnown RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 RHOT2Q8IXI1 618 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 CARNMT1Q8N4J0 409 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 TSTD1Q8NFU3 115 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 RPLP0P6Q8NHW5 317 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 USP33Q8TEY7 942 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 NTAN1Q96AB6 310 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 PIWIL1Q96J94 861 aaKnown RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 CCDC114Q96M63 670 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 PHOX2BQ99453 314 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 CATSPERBQ9H7T0 1116 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 NHEJ1Q9H9Q4 299 aaPredicted RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 PIGVQ9NUD9 493 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 ZSCAN32Q9NX65 697 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 ELOVL2Q9NXB9 296 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 CTTNBP2NLQ9P2B4 639 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 SUN2Q9UH99 717 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 GGA2Q9UJY4 613 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 FBXO10Q9UK96 956 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 INTUQ9ULD6 942 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 MMP17Q9ULZ9 603 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 HPCAL4Q9UM19 191 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 STARD13Q9Y3M8 1113 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 MTF2Q9Y483 593 aaPredicted RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 FARP1Q9Y4F1 1045 aaPredicted RBP7.71□□□□□ -1.18
NR1I3-231ENST00000512340 PCDHGA2Q9Y5H1 932 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 CACNA1IQ9P0X4 2223 aa7.71□□□□□ -1.18
NR1I3-231ENST00000512340 KIF26AQ9ULI4 1882 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 MYO15AQ9UKN7 3530 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 A0A087X0T9 212 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 PRR23AA6NEV1 266 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 TMEM191CA6NGB0 347 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 FGF10O15520 208 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 DAPK3O43293 454 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 SRGAP2O75044 1071 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 KLF8O95600 359 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 RHOCP08134 193 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 FAM228BP0C875 321 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 HNRNPLP14866 589 aaKnown RBP eCLIP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 HOXD9P28356 352 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 OR1E1P30953 314 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 ADRA1BP35368 520 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 PCK1P35558 622 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 TIE1P35590 1138 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 SSR1P43307 286 aaKnown RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 TERF1P54274 439 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 GEMIN4P57678 1058 aaKnown RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 PTP4A2Q12974 167 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 CCDC14Q49A88 953 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 USP39Q53GS9 565 aaKnown RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 BOLA3Q53S33 107 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 FAM133BQ5BKY9 247 aaKnown RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 ZFYVE27Q5T4F4 411 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 HGSNATQ68CP4 663 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 RWDD4Q6NW29 188 aaKnown RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 SERPINA13PQ6UXR4 307 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 ZNF783Q6ZMS7 281 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 SETD3Q86TU7 594 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 METTL3Q86U44 580 aaKnown RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 FAM131BQ86XD5 332 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 PGBD3Q8N328 593 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 EMC1Q8N766 993 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 KDM1BQ8NB78 822 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 CENPIQ92674 756 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 NKD2Q969F2 451 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 WBP2Q969T9 261 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 TBC1D31Q96DN5 1066 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 SPACA7Q96KW9 195 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 SYT11Q9BT88 431 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 C2orf49Q9BVC5 232 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 ZYG11BQ9C0D3 744 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 MUC3BQ9H195 1237 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 OSBPL2Q9H1P3 480 aa7.7□□□□□ -1.18
NR1I3-231ENST00000512340 PRMT8Q9NR22 394 aaPredicted RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 RBM12Q9NTZ6 932 aaKnown RBP7.7□□□□□ -1.18
NR1I3-231ENST00000512340 ABCB8Q9NUT2 735 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms