RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PRODHO43272 600 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 GLRA3O75311 464 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 MAP3K6O95382 1288 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 DLGAP3O95886 979 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 DNTTP04053 509 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 HOXC6P09630 235 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 TPBGLP0DKB5 382 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 LBPP18428 481 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 CYP11B2P19099 503 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 CES1P23141 567 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 AKT2P31751 481 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 MAD2L1Q13257 205 aaPredicted RBP5.9□□□□□ -1.46
USP38-203ENST00000511739 CNGA2Q16280 664 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 COLEC12Q5KU26 742 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 FAM46CQ5VWP2 391 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 SCARA3Q6AZY7 606 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 CAMK1DQ8IU85 385 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 SGSM3Q96HU1 749 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 C7orf25Q9BPX7 421 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 BCLAF3A2AJT9 711 aaKnown RBP5.9□□□□□ -1.46
USP38-203ENST00000511739 TRIM49D1C9J1S8 452 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 SCN2BO60939 215 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 IL1BP01584 269 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 ADH1AP07327 375 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 PDHBP11177 359 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 MLH1P40692 756 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 PEX5P50542 639 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 PRKAG1P54619 331 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 INHBEP58166 350 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 PURAQ00577 322 aaKnown RBP5.9□□□□□ -1.46
USP38-203ENST00000511739 VAC14Q08AM6 782 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 TRAF2Q12933 501 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 CRYMQ14894 314 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 FSCN1Q16658 493 aaKnown RBP5.9□□□□□ -1.46
USP38-203ENST00000511739 RBM23Q86U06 439 aaKnown RBP5.9□□□□□ -1.46
USP38-203ENST00000511739 CACTIN-AS1Q8N1I8 211 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 EFCAB3Q8N7B9 438 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 SMYD1Q8NB12 490 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 GRIN3AQ8TCU5 1115 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 CRELD1Q96HD1 420 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 ZNF354BQ96LW1 612 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 SERPINB11Q96P15 392 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 ARHGAP9Q9BRR9 750 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 TRIM9Q9C026 710 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 POLR1BQ9H9Y6 1135 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 SNTG2Q9NY99 539 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 VAV3Q9UKW4 847 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 DUSP12Q9UNI6 340 aa5.9□□□□□ -1.46
USP38-203ENST00000511739 RPTORQ8N122 1335 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 TMEM191CA6NGB0 347 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 CCNB2O95067 398 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 KRT75O95678 551 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 PIK3R1P27986 724 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 IGFALSP35858 605 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 CCL23P55773 120 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 SP3Q02447 781 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 BST2Q10589 180 aaKnown RBP5.9□□□□□ -1.47
USP38-203ENST00000511739 CSHL1Q14406 222 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 SEC23AQ15436 765 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 SLC18A3Q16572 532 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 RAET1GQ6H3X3 334 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 LRP10Q7Z4F1 713 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 FAM124AQ86V42 546 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 CCDC33Q8N5R6 958 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 RTL3Q8N8U3 475 aaKnown RBP5.9□□□□□ -1.47
USP38-203ENST00000511739 EDEM1Q92611 657 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 PROX1Q92786 737 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 EPB41L4BQ9H329 900 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 ABHD16BQ9H3Z7 469 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 PIGUQ9H490 435 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 FBXO28Q9NVF7 368 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 AP4E1Q9UPM8 1137 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 SLC27A6Q9Y2P4 619 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 VGLL3A8MV65 326 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 NR5A2O00482 541 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 ATMINO43313 823 aaPredicted RBP5.9□□□□□ -1.47
USP38-203ENST00000511739 RASGRP1O95267 797 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 CATP04040 527 aaKnown RBP5.9□□□□□ -1.47
USP38-203ENST00000511739 PTPN1P18031 435 aaKnown RBP5.9□□□□□ -1.47
USP38-203ENST00000511739 RASA1P20936 1047 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 COMTP21964 271 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 HPCAL1P37235 193 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 SARSP49591 514 aaKnown RBP5.9□□□□□ -1.47
USP38-203ENST00000511739 RBBP4Q09028 425 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 NTRK3Q16288 839 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 SMU1Q2TAY7 513 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 NDUFAF6Q330K2 333 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 GLT6D1Q7Z4J2 308 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 LONP2Q86WA8 852 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 ANKS1AQ92625 1134 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 SH3GL3Q99963 347 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 TRIM51Q9BSJ1 452 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 GLIS2Q9BZE0 524 aaPredicted RBP5.9□□□□□ -1.47
USP38-203ENST00000511739 SPATC1LQ9H0A9 340 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 RAD21L1Q9H4I0 556 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.47
USP38-203ENST00000511739 TRPV2Q9Y5S1 764 aa5.9□□□□□ -1.47
USP38-203ENST00000511739 ISM1B1AKI9 464 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MCIDASD6RGH6 385 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 STX11O75558 287 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms