RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SCAMP1O15126 338 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 SIN3BO75182 1162 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 NEBLO76041 1014 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 KRT7P08729 469 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 MAT2AP31153 395 aaKnown RBP11.26□□□□□ -0.61
SNF8-207ENST00000509995 UGT1A5P35504 534 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 NUDT1P36639 197 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 KCNMA1Q12791 1236 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 EIF3IQ13347 325 aaKnown RBP11.26□□□□□ -0.61
SNF8-207ENST00000509995 CAPRIN2Q6IMN6 1127 aaKnown RBP11.26□□□□□ -0.61
SNF8-207ENST00000509995 ZCCHC8Q6NZY4 707 aaKnown RBP11.26□□□□□ -0.61
SNF8-207ENST00000509995 PAQR9Q6ZVX9 377 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 SND1Q7KZF4 910 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNF8-207ENST00000509995 RSRC2Q7L4I2 434 aaKnown RBP11.26□□□□□ -0.61
SNF8-207ENST00000509995 MMAAQ8IVH4 418 aaKnown RBP11.26□□□□□ -0.61
SNF8-207ENST00000509995 AHI1Q8N157 1196 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 CPXM2Q8N436 756 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 FBXO39Q8N4B4 442 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 KCTD17Q8N5Z5 321 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 ZMIZ2Q8NF64 920 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 KLHDC7BQ96G42 594 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 ANKRD36BP1Q96IX9 119 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 SLC12A9Q9BXP2 914 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 DCLK3Q9C098 648 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 PDE11AQ9HCR9 933 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 ABCB8Q9NUT2 735 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 CUEDC1Q9NWM3 386 aaPredicted RBP11.26□□□□□ -0.61
SNF8-207ENST00000509995 NCKIPSDQ9NZQ3 722 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 SEL1LQ9UBV2 794 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 CYTH4Q9UIA0 394 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 AGO1Q9UL18 857 aaKnown RBP11.26□□□□□ -0.61
SNF8-207ENST00000509995 DMTF1Q9Y222 760 aa11.26□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3DA0A087WVF3 549 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3IA0A087WXS9 549 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3EA0A087X179 549 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3KA0A087X1G2 549 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3FA6NER0 549 aaPredicted RBP11.25□□□□□ -0.61
SNF8-207ENST00000509995 A8MXQ7 604 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3LB9A6J9 549 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
SNF8-207ENST00000509995 CASC3O15234 703 aaKnown RBP11.25□□□□□ -0.61
SNF8-207ENST00000509995 NVLO15381 856 aaKnown RBP11.25□□□□□ -0.61
SNF8-207ENST00000509995 SEMA7AO75326 666 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 AP1G2O75843 785 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 ATP5BP06576 529 aaKnown RBP11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3HP0C7X1 549 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 RARGP13631 454 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 GOT1P17174 413 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 SLC8A1P32418 973 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 IL17AQ16552 155 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 HNRNPA1L2Q32P51 320 aaKnown RBP11.25□□□□□ -0.61
SNF8-207ENST00000509995 POM121L1PQ3SYA9 428 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 C1QL3Q5VWW1 255 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 MBLAC2Q68D91 279 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3GQ6DHY5 549 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3CQ6IPX1 549 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 RAB11FIP2Q7L804 512 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 KIAA0907Q7Z7F0 614 aaPredicted RBP11.25□□□□□ -0.61
SNF8-207ENST00000509995 DSG4Q86SJ6 1040 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 FAM217AQ8IXS0 508 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 TBC1D3Q8IZP1 549 aaPredicted RBP11.25□□□□□ -0.61
SNF8-207ENST00000509995 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNF8-207ENST00000509995 WDR48Q8TAF3 677 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 MYO19Q96H55 970 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 PLIN2Q99541 437 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 MED10Q9BTT4 135 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 NMUR1Q9HB89 426 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 PDRG1Q9NUG6 133 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 INTS13Q9NVM9 706 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 GGA2Q9UJY4 613 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 SCML2Q9UQR0 700 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 CA5BQ9Y2D0 317 aa11.25□□□□□ -0.61
SNF8-207ENST00000509995 A0A087X0B3 334 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 A0A1W2PQH9 124 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 EME2A4GXA9 379 aaPredicted RBP11.24□□□□□ -0.61
SNF8-207ENST00000509995 WIPF3A6NGB9 483 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 PRAMEF26H0Y7S4 382 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 HMBSP08397 361 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 PABPC1P11940 636 aaKnown RBP11.24□□□□□ -0.61
SNF8-207ENST00000509995 PSMD8P48556 350 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 MLLT10P55197 1068 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 COG7P83436 770 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 SPIDRQ14159 915 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 PERM1Q5SV97 790 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 ZC3H18Q86VM9 953 aaKnown RBP11.24□□□□□ -0.61
SNF8-207ENST00000509995 GPBP1Q86WP2 473 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 DTX1Q86Y01 620 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 DENND1CQ8IV53 801 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 TMEM145Q8NBT3 493 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 OR5B17Q8NGF7 314 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 MOCOSQ96EN8 888 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 SMOQ99835 787 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 ST6GALNAC4Q9H4F1 302 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 EPB41L5Q9HCM4 733 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 PCDHB11Q9Y5F2 797 aa11.24□□□□□ -0.61
SNF8-207ENST00000509995 SPG11Q96JI7 2443 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 ABCA2Q9BZC7 2435 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms