RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 GRIA4P48058 902 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 FMO5P49326 533 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 TBX4P57082 545 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 ARID5AQ03989 594 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 CNGA2Q16280 664 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 MPP7Q5T2T1 576 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 ZNF658Q5TYW1 1059 aaPredicted RBP16.53■□□□□ 0.24
RAB40C-202ENST00000509637 KIAA0895LQ68EN5 471 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 ISM2Q6H9L7 571 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 IL27RAQ6UWB1 636 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 GATAD2AQ86YP4 633 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 DHX40Q8IX18 779 aaKnown RBP16.53■□□□□ 0.24
RAB40C-202ENST00000509637 APCDD1Q8J025 514 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 SIX6OS1Q8N1H7 587 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 ADAM32Q8TC27 787 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 DQX1Q8TE96 717 aaKnown RBP16.53■□□□□ 0.24
RAB40C-202ENST00000509637 KREMEN1Q96MU8 473 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 MIS12Q9H081 205 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 PABPC3Q9H361 631 aaKnown RBP16.53■□□□□ 0.24
RAB40C-202ENST00000509637 HESX1Q9UBX0 185 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 CYTH4Q9UIA0 394 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 A0A1W2PR77 199 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 MID1O15344 667 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.24
RAB40C-202ENST00000509637 PCDHGA12O60330 932 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 VAV1P15498 845 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 POLR2EP19388 210 aaKnown RBP16.52■□□□□ 0.24
RAB40C-202ENST00000509637 BMP6P22004 513 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 RPL34P49207 117 aaKnown RBP16.52■□□□□ 0.24
RAB40C-202ENST00000509637 FKBP3Q00688 224 aaKnown RBP16.52■□□□□ 0.24
RAB40C-202ENST00000509637 HNRNPA1L2Q32P51 320 aaKnown RBP16.52■□□□□ 0.24
RAB40C-202ENST00000509637 NCEH1Q6PIU2 408 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 DHRS13Q6UX07 377 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 AADATQ8N5Z0 425 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 IGSF8Q969P0 613 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 TJP2Q9UDY2 1190 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 PCDHB4Q9Y5E5 795 aa16.52■□□□□ 0.24
RAB40C-202ENST00000509637 A0A1B0GTQ1 180 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 A0A1W2PP55 124 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 A0A1W2PPC4 97 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 FAM47DPA6NHR8 397 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 PLK4O00444 970 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 PAPSS1O43252 624 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-202ENST00000509637 STX10O60499 249 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 DNTTP04053 509 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 PAEPP09466 180 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 SLC8A3P57103 927 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 ZBTB16Q05516 673 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 EIF4EBP2Q13542 120 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-202ENST00000509637 ACAP1Q15027 740 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 SMAD1Q15797 465 aaKnown RBP16.51■□□□□ 0.23
RAB40C-202ENST00000509637 CCDC157Q569K6 752 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 DCAF6Q58WW2 860 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 MS4A13Q5J8X5 152 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 ZNF776Q68DI1 518 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-202ENST00000509637 DENND1BQ6P3S1 775 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 RRAGAQ7L523 313 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 MMAAQ8IVH4 418 aaKnown RBP16.51■□□□□ 0.23
RAB40C-202ENST00000509637 SCUBE3Q8IX30 993 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 IRGQQ8WZA9 623 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 PTPRN2Q92932 1015 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 AZIN2Q96A70 460 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 CDC6Q99741 560 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 SGK2Q9HBY8 427 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 ACP6Q9NPH0 428 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 FBXL12Q9NXK8 326 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 DKK4Q9UBT3 224 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 ARMCX3Q9UH62 379 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-202ENST00000509637 SUN2Q9UH99 717 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 ERVW-1Q9UQF0 538 aa16.51■□□□□ 0.23
RAB40C-202ENST00000509637 M0QYV0 167 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 VILLO15195 856 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 TNFSF14O43557 240 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 ATP5BP06576 529 aaKnown RBP16.5■□□□□ 0.23
RAB40C-202ENST00000509637 GPD2P43304 727 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 STK19P49842 368 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-202ENST00000509637 ZNF445P59923 1031 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 DNAJC3Q13217 504 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 CST6Q15828 149 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 PITRM1Q5JRX3 1037 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 TAC4Q86UU9 113 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 MFN1Q8IWA4 741 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 STK40Q8N2I9 435 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 CARNMT1Q8N4J0 409 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 OR52K2Q8NGK3 314 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 RPL10LQ96L21 214 aaKnown RBP16.5■□□□□ 0.23
RAB40C-202ENST00000509637 DNAI2Q9GZS0 605 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 SCAND2PQ9GZW5 306 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-202ENST00000509637 KIAA1257Q9ULG3 409 aa16.5■□□□□ 0.23
RAB40C-202ENST00000509637 PMM2O15305 246 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 IRAK1P51617 712 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 PPP2CBP62714 309 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 PPP2CAP67775 309 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 BNIP3Q12983 259 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 ARID5BQ14865 1188 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 TAF5Q15542 800 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 TTI2Q6NXR4 508 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 IGSF10Q6WRI0 2623 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 USP30Q70CQ3 517 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 KANSL1Q7Z3B3 1105 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms