RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SMG5Q9UPR3 1016 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 SNX9Q9Y5X1 595 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 CHD7Q9P2D1 2997 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 PLXNA4Q9HCM2 1894 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 BRWD1Q9NSI6 2320 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TEX51A0A1B0GUA7 166 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 AQP7O14520 342 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 PPEF2O14830 753 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 GRM6O15303 877 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TBC1D4O60343 1298 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 NPHS1O60500 1241 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 CXCL14O95715 111 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 NTRK1P04629 796 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 MPOP05164 745 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 ATP1A3P13637 1013 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 NAT1P18440 290 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 PON1P27169 355 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 GNL1P36915 607 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 ARL4AP40617 200 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 BCL6P41182 706 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 BRCC3P46736 316 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 GUCY2FP51841 1108 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 CORO7P57737 925 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 PRR5P85299 388 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TSPY1Q01534 308 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 UBXN1Q04323 297 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 INCA1Q0VD86 236 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 SSPNQ14714 243 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 NR1I3Q14994 352 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 PTPN14Q15678 1187 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 PLEKHN1Q494U1 663 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 HSP90AA4PQ58FG1 418 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 FIGNQ5HY92 759 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TPGS2Q68CL5 300 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 SLC8B1Q6J4K2 584 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TMC6Q7Z403 805 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TMEM173Q86WV6 379 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 THNSL2Q86YJ6 484 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 DCP1BQ8IZD4 617 aaKnown RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 ADGRF2Q8IZF7 708 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 PDCL2Q8N4E4 241 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 MRPL43Q8N983 215 aaKnown RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 LNX1Q8TBB1 728 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 C2orf15Q8WU43 125 aaKnown RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 HDAC7Q8WUI4 952 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 DIO2Q92813 273 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 SEMA4DQ92854 862 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TNIP3Q96KP6 325 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 CEP295NLQ96MC4 621 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 MMS19Q96T76 1030 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TCF25Q9BQ70 676 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 INTS2Q9H0H0 1204 aaKnown RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 CDIP1Q9H305 208 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 SNX25Q9H3E2 840 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 ALG13Q9NP73 1137 aaKnown RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 CD320Q9NPF0 282 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 ENTPD7Q9NQZ7 604 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 TAB2Q9NYJ8 693 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 PPARGC1AQ9UBK2 798 aaKnown RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 MTRRQ9UBK8 725 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 NDOR1Q9UHB4 597 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 CDH9Q9ULB4 789 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 KIAA1257Q9ULG3 409 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 MYO6Q9UM54 1294 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 BARX2Q9UMQ3 279 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 L1RE1Q9UN81 338 aa5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P44-201ENST00000508597 ITIH6Q6UXX5 1313 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 MYH10P35580 1976 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 DNAJC8O75937 253 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 CYBBP04839 570 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 PAEPP09466 180 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 TMEM253P0C7T8 217 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 CCDC172P0C7W6 258 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 SRGAP2BP0DMP2 458 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 MED14OSP0DP75 135 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 SLC9A1P19634 815 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 TKTP29401 623 aaKnown RBP5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 PBX3P40426 434 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 NDUFV1P49821 464 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 BPIFB4P59827 614 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 GPR85P60893 370 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 CUL2Q13617 745 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 CAMK1Q14012 370 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 TRIM14Q14142 442 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 SYCP1Q15431 976 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 STILQ15468 1287 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 PSMD5Q16401 504 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 NFE2Q16621 373 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 MEA1Q16626 185 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 SOWAHAQ2M3V2 549 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 CTXN3Q4LDR2 81 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 KLHDC7AQ5VTJ3 777 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 WSCD1Q658N2 575 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 PAQR3Q6TCH7 311 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 C4orf50Q6ZRC1 276 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 CEP57Q86XR8 500 aa5.81□□□□□ -1.48
HMGB1P44-201ENST00000508597 C1QL4Q86Z23 238 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms