RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PPM1AP35813 382 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 FAM3BP58499 235 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 SHC2P98077 582 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 ODF3L2Q3SX64 289 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 MAP9Q49MG5 647 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 RINT1Q6NUQ1 792 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 DDIASQ8IXT1 998 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 TMEM41AQ96HV5 264 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 PRPF18Q99633 342 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 ELAC2Q9BQ52 826 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 TP63Q9H3D4 680 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 AAMDCQ9H7C9 122 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 CHST12Q9NRB3 414 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 CDC23Q9UJX2 597 aa5.94□□□□□ -1.46
TOPBP1-206ENST00000508524 A6NNC1 897 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 KIF28PB7ZC32 967 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 DNPH1O43598 174 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 ALDOAP04075 364 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 ALPLP05186 524 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 AKT1P31749 480 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 HTR6P50406 440 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 NANOS2P60321 138 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 BTKQ06187 659 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 PRTGQ2VWP7 1150 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 NUGGCQ68CJ6 796 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 ISM2Q6H9L7 571 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 LRIG3Q6UXM1 1119 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 NRSN1Q8IZ57 195 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 ADPRHL1Q8NDY3 354 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 WDR60Q8WVS4 1066 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 REXO5Q96IC2 774 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 WDR83Q9BRX9 315 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 HTATIP2Q9BUP3 242 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 PCGF6Q9BYE7 350 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 NLRC4Q9NPP4 1024 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 RAB21Q9UL25 225 aa5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 TRPC5Q9UL62 973 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-206ENST00000508524 SMARCA4P51532 1647 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 BAZ1BQ9UIG0 1483 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 C3orf70A6NLC5 250 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 CYP3A4P08684 503 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 THBS3P49746 956 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 STARD3Q14849 445 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 C6orf10Q5SRN2 563 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 DAB2IPQ5VWQ8 1189 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 RTL10Q7L3V2 364 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 KAT2AQ92830 837 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 ATP2A3Q93084 1043 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 CLMNQ96JQ2 1002 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 MECRQ9BV79 373 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 CCDC134Q9H6E4 229 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 SFXN1Q9H9B4 322 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 IL21RQ9HBE5 538 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 TXNRD2Q9NNW7 524 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 SPAG4Q9NPE6 437 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 NFU1Q9UMS0 254 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 LAMP3Q9UQV4 416 aa5.92□□□□□ -1.46
TOPBP1-206ENST00000508524 CYP3A7-CYP3A51PA0A087WV96 503 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 RHODO00212 210 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 SYF2O95926 243 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 ALDOCP09972 364 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 CHRNB1P11230 501 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 CYP3A7P24462 503 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 TECP42680 631 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 TRIM60Q495X7 471 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 ZNF549Q6P9A3 640 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 MDGA2Q7Z553 956 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 GATAD2AQ86YP4 633 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 OR1N1Q8NGS0 311 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 FAM71BQ8TC56 605 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 STYXQ8WUJ0 223 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 MARK4Q96L34 752 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 OSBPL5Q9H0X9 879 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 MLXIPQ9HAP2 919 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 ARFGAP3Q9NP61 516 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 SLC12A4Q9UP95 1085 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 SLC8A2Q9UPR5 921 aa5.91□□□□□ -1.46
TOPBP1-206ENST00000508524 DPPA5A6NC42 116 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 FAM90A18PA6NE21 464 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 FAM90A16PA6NEW6 464 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 GOLGA6L3A6NEY3 463 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 FAM90A9PA6NNJ1 464 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 SLC38A8A6NNN8 435 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 FAM90A5PA8MXJ8 464 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 ZC3H11AO75152 810 aaKnown RBP eCLIP5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 TNFRSF6BO95407 300 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 FAM90A15PP0C7V4 464 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 FAM90A14PP0C7W9 464 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 HOXB2P14652 356 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 CCKARP32238 428 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 GRK5P34947 590 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 POLD2P49005 469 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 SPARCL1Q14515 664 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 TMEM88Q6PEY1 159 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 B4GALNT4Q76KP1 1039 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 TMEM199Q8N511 208 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 FZD3Q9NPG1 666 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms