RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 HACD1B0YJ81 288 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 VAPBO95292 243 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 PIGNO95427 931 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ITGAVP06756 1048 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 VDRP11473 427 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 TCF3P15923 654 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 HOXB8P17481 243 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 PTGS2P35354 604 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CHKAP35790 457 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CSE1LP55060 971 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 HPCAP84074 193 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 VPS72Q15906 364 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 GALNTL6Q49A17 601 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RBM20Q5T481 1227 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 C6orf89Q6UWU4 347 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ISLR2Q6UXK2 745 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 AMIGO2Q86SJ2 522 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 FAM228AQ86W67 206 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 SULF1Q8IWU6 871 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 WDR36Q8NI36 951 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 MUC13Q9H3R2 512 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CCDC167Q9P0B6 97 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 LIMD1Q9UGP4 676 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 TRMT6Q9UJA5 497 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 VANGL2Q9ULK5 521 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 DHRS12A0PJE2 317 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 PRR5-ARHGAP8B1AHC4 643 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 F8W810 466 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 MYL12BO14950 172 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 HDAC3O15379 428 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 LIASO43766 372 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 CSPG5O95196 566 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 PRKAR1AP10644 381 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 ARHGAP8P85298 464 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 METTL21CQ5VZV1 264 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 KIAA0408Q6ZU52 694 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 TDRPQ86YL5 185 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 PCDH20Q8N6Y1 951 aaKnown RBP7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 PIK3C3Q8NEB9 887 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 MARCH7Q9H992 704 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 JPH1Q9HDC5 661 aaPredicted RBP7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 AFF4Q9UHB7 1163 aaKnown RBP7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 ADGRB2O60241 1585 aa7.46□□□□□ -1.21
UBE2D3-224ENST00000508474 UBE2Q2LH0YL09 131 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 PEX11AO75192 247 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 VPS26AO75436 327 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 FLT3P36888 993 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CD151P48509 253 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 ANXA11P50995 505 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CDC16Q13042 620 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 DGCR6Q14129 220 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 TMEM132DQ14C87 1099 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CCDC157Q569K6 752 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 DGKKQ5KSL6 1271 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 MFSD7Q6UXD7 560 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 TBC1D21Q8IYX1 336 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 BPIFB6Q8NFQ5 453 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 AP3S1Q92572 193 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 MXRA8Q9BRK3 442 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 MMTAG2Q9BU76 263 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CXorf21Q9HAI6 301 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 XPNPEP3Q9NQH7 507 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 DNAJC28Q9NX36 388 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 DOLKQ9UPQ8 538 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 ASTN2O75129 1339 aaPredicted RBP7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 BBIP1A8MTZ0 92 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 FAM220BPB1ANY3 271 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 MAFGO15525 162 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 SEMA3DO95025 777 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 OLR1P78380 273 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CSHL1Q14406 222 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 GOLGA7BQ2TAP0 167 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 C2CD6Q53TS8 623 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 NIPAL1Q6NVV3 410 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 XRRA1Q6P2D8 792 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 C11orf88Q6PI97 169 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CRTC3Q6UUV7 619 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CASP12Q6UXS9 341 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 PRR23CQ6ZRP0 262 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 PROSER1Q86XN7 944 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 COLGALT1Q8NBJ5 622 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 RAB2BQ8WUD1 216 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 UCMAQ8WVF2 138 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 ASIC4Q96FT7 647 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CGRRF1Q99675 332 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 PRKD2Q9BZL6 878 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CYP4F12Q9HCS2 524 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 MRPL39Q9NYK5 338 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 PRKAG3Q9UGI9 489 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 SYNPO2Q9UMS6 1093 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 PCDHA11Q9Y5I1 949 aa7.46□□□□□ -1.22
UBE2D3-224ENST00000508474 CHRM1P11229 460 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 PSMA3P25788 255 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ADSLP30566 484 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 AKR1D1P51857 326 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 EMC2Q15006 297 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 NFIL3Q16649 462 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF284Q2VY69 593 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 TIGD7Q6NT04 549 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms