RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 SMTNL2Q2TAL5 461 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 ZACNQ401N2 412 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 ZNF569Q5MCW4 686 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 PGBD2Q6P3X8 592 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 PIM3Q86V86 326 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 PAQR4Q8N4S7 273 aaPredicted RBP5.64□□□□□ -1.51
DHFR-204ENST00000508282 ADPRHL1Q8NDY3 354 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 CLEC4CQ8WTT0 213 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 RSC1A1Q92681 617 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 ATP2A3Q93084 1043 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 EME1Q96AY2 570 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 EID2BQ96D98 161 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 NAF1Q96HR8 494 aaKnown RBP5.64□□□□□ -1.51
DHFR-204ENST00000508282 KATNAL1Q9BW62 490 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.64□□□□□ -1.512e-8■□□□□ 10.2
DHFR-204ENST00000508282 PCDHA12Q9UN75 941 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 LZTS1Q9Y250 596 aa5.64□□□□□ -1.51
DHFR-204ENST00000508282 ZNF335Q9H4Z2 1342 aaPredicted RBP5.64□□□□□ -1.51
DHFR-204ENST00000508282 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 CCDC194A0A1B0GVG4 234 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 H3BNX3 289 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 KCNAB3O43448 404 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 SKAP2O75563 359 aaPredicted RBP5.63□□□□□ -1.51
DHFR-204ENST00000508282 NDUFB8O95169 186 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 EPN2O95208 641 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 LARGE1O95461 756 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 FOXG1P55316 489 aaPredicted RBP5.63□□□□□ -1.51
DHFR-204ENST00000508282 PUM3Q15397 648 aaKnown RBP5.63□□□□□ -1.51
DHFR-204ENST00000508282 DLGAP5Q15398 846 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 PIK3CD-AS1Q5SR53 167 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 MANEAQ5SRI9 462 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 DDIASQ8IXT1 998 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 HMGB4Q8WW32 186 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 WACQ9BTA9 647 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 HTATIP2Q9BUP3 242 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 OSBPL5Q9H0X9 879 aaPredicted RBP5.63□□□□□ -1.51
DHFR-204ENST00000508282 AAMDCQ9H7C9 122 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 MLXIPQ9HAP2 919 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 TXNRD2Q9NNW7 524 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 SQORQ9Y6N5 450 aa5.63□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3DA0A087WVF3 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3IA0A087WXS9 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3EA0A087X179 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3KA0A087X1G2 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TMEM272A0A1B0GTI8 110 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3BA6NDS4 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 FAM90A10PA6NDY2 464 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3FA6NER0 549 aaPredicted RBP5.62□□□□□ -1.51
DHFR-204ENST00000508282 CD8B2A6NJW9 211 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 B4DGG1 531 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3LB9A6J9 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 SYT5O00445 386 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3HP0C7X1 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 PNLIPRP1P54315 467 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 MAPK7Q13164 816 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 FHL1Q13642 323 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 INPP5JQ15735 1006 aaPredicted RBP5.62□□□□□ -1.51
DHFR-204ENST00000508282 ASPHD1Q5U4P2 390 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3GQ6DHY5 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 ISM2Q6H9L7 571 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3CQ6IPX1 549 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 LIN54Q6MZP7 749 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TMEM88Q6PEY1 159 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 LRIG3Q6UXM1 1119 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 NOL8Q76FK4 1167 aaKnown RBP5.62□□□□□ -1.51
DHFR-204ENST00000508282 RTL10Q7L3V2 364 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 MDGA2Q7Z553 956 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 TBC1D3Q8IZP1 549 aaPredicted RBP5.62□□□□□ -1.51
DHFR-204ENST00000508282 KAT2AQ92830 837 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 SLC25A28Q96A46 364 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 WDR83Q9BRX9 315 aaKnown RBP5.62□□□□□ -1.51
DHFR-204ENST00000508282 RTKNQ9BST9 563 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 FAM234AQ9H0X4 552 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 IL21RQ9HBE5 538 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 DECR2Q9NUI1 292 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 DAPP1Q9UN19 280 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 LAMP3Q9UQV4 416 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 COPG1Q9Y678 874 aaKnown RBP5.62□□□□□ -1.51
DHFR-204ENST00000508282 LMTK3Q96Q04 1460 aa5.62□□□□□ -1.51
DHFR-204ENST00000508282 A6NNC1 897 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 TRIM38O00635 465 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 CRYABP02511 175 aaKnown RBP5.61□□□□□ -1.51
DHFR-204ENST00000508282 ITGA2BP08514 1039 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 SCP2P22307 547 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 SERPINF1P36955 418 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 RNASELQ05823 741 aaKnown RBP5.61□□□□□ -1.51
DHFR-204ENST00000508282 NUGGCQ68CJ6 796 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 SLC44A2Q8IWA5 706 aaPredicted RBP5.61□□□□□ -1.51
DHFR-204ENST00000508282 ATG16L2Q8NAA4 619 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 SCAMP5Q8TAC9 235 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 NSMCE1Q8WV22 266 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 NLRP4Q96MN2 994 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 SORBS1Q9BX66 1292 aaKnown RBP5.61□□□□□ -1.51
DHFR-204ENST00000508282 PLCB1Q9NQ66 1216 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 PRDM8Q9NQV8 689 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 LIN7CQ9NUP9 197 aaKnown RBP5.61□□□□□ -1.51
DHFR-204ENST00000508282 SLC8A2Q9UPR5 921 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 DAAM1Q9Y4D1 1078 aa5.61□□□□□ -1.51
DHFR-204ENST00000508282 DPPA5A6NC42 116 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms