RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 DDIT3P35638 169 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 SHC2P98077 582 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 KPNB1Q14974 876 aaKnown RBP4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 RALBP1Q15311 655 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 CERKLQ49MI3 558 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 AWAT1Q58HT5 328 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 ATG16L1Q676U5 607 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 DENND1BQ6P3S1 775 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 PNLDC1Q8NA58 520 aaKnown RBP4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 HTRA1Q92743 480 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 STAMQ92783 540 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 CELF1Q92879 486 aaKnown RBP4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 ZNF764Q96H86 408 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 ABHD14AQ9BUJ0 271 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 HERC2P3Q9BVR0 1158 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 KRTAP9-3Q9BYQ3 159 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 GPR63Q9BZJ6 419 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 CLPBQ9H078 707 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 ARL8BQ9NVJ2 186 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 MTMR4Q9NYA4 1195 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 ARPP21Q9UBL0 812 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 AFG3L2Q9Y4W6 797 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 LMTK3Q96Q04 1460 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 SPATA31A5Q5VU36 1347 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 SPATA31A6Q5VVP1 1343 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 SPATA31A7Q8IWB4 1347 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 A6NLC8 198 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 PRRT4C9JH25 899 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 TMEM232C9JQI7 657 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 J3KRW8 73 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 ANP32CO43423 234 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 EPB41L2O43491 1005 aaKnown RBP4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 TUBP50607 506 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 TGFB2P61812 414 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 DMWDQ09019 674 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 ALKBH1Q13686 389 aaKnown RBP4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 THOC5Q13769 683 aaKnown RBP4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 RUNDC3AQ59EK9 446 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 WDR45BQ5MNZ6 344 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 PRAMEF17Q5VTA0 474 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 ANO7Q6IWH7 933 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 RETSATQ6NUM9 610 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 PCSK4Q6UW60 755 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 HEATR4Q86WZ0 1026 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 CHSY1Q86X52 802 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 UEVLDQ8IX04 471 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 ENDOVQ8N8Q3 282 aaKnown RBP4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 KCNJ9Q92806 393 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 RITA1Q96K30 269 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 SCAND2PQ9GZW5 306 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 PCED1AQ9H1Q7 454 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 UBN1Q9NPG3 1134 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 SUFUQ9UMX1 484 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 TMEM98Q9Y2Y6 226 aa4.5□□□□□ -1.69
HMGB1P28-201ENST00000507778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 PEX12O00623 359 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 DSCR3O14972 297 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 PROP1O75360 226 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 CNTN5O94779 1100 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 IGLV2-14P01704 120 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 IFIT1P09914 478 aaKnown RBP4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 RFPL3SP0C7P2 107 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 HOXB9P17482 250 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 TGM2P21980 687 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 PRPH2P23942 346 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 PGM1P36871 562 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 PTH2RP49190 550 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 CLK3P49761 638 aaKnown RBP4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 GOLGA8FQ08AF8 430 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 DDX10Q13206 875 aaKnown RBP4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 ANXA2RQ3ZCQ2 193 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 STRIP1Q5VSL9 837 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 LIPMQ5VYY2 423 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 FCRLBQ6BAA4 426 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 RFX6Q8HWS3 928 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 ADGRF3Q8IZF5 1079 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 SLC16A11Q8NCK7 471 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 P2RY11Q96G91 374 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 ASB2Q96Q27 587 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 SLC26A6Q9BXS9 759 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 OSBPL5Q9H0X9 879 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 IKZF4Q9H2S9 585 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 UNC45AQ9H3U1 944 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 SLC22A11Q9NSA0 550 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 THAP1Q9NVV9 213 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 KLQ9UEF7 1012 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 ZNHIT2Q9UHR6 403 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 SLC25A13Q9UJS0 675 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 GDAQ9Y2T3 454 aa4.49□□□□□ -1.69
HMGB1P28-201ENST00000507778 WDR33Q9C0J8 1336 aaKnown RBP4.48□□□□□ -1.69
HMGB1P28-201ENST00000507778 NPIPB13A6NJU9 1138 aa4.48□□□□□ -1.69
HMGB1P28-201ENST00000507778 NPIPB5A8MRT5 1133 aa4.48□□□□□ -1.69
HMGB1P28-201ENST00000507778 NPIPB4C9JG80 1138 aa4.48□□□□□ -1.69
HMGB1P28-201ENST00000507778 DHX16O60231 1041 aaKnown RBP4.48□□□□□ -1.69
HMGB1P28-201ENST00000507778 C1QL1O75973 258 aa4.48□□□□□ -1.69
HMGB1P28-201ENST00000507778 RNF8O76064 485 aa4.48□□□□□ -1.69
HMGB1P28-201ENST00000507778 WEE2P0C1S8 567 aa4.48□□□□□ -1.69
HMGB1P28-201ENST00000507778 NHLRC4P0CG21 123 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms