RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 NEUROG2Q9H2A3 272 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 MTG2Q9H4K7 406 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 TMEM8AQ9HCN3 771 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 GDF3Q9NR23 364 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 CISHQ9NSE2 258 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 SFMBT1Q9UHJ3 866 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 INTS6Q9UL03 887 aaKnown RBP17.1■□□□□ 0.33
SNF8-205ENST00000507302 AK5Q9Y6K8 562 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 ITIH6Q6UXX5 1313 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 NAV2Q8IVL1 2488 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 CAPN8A6NHC0 703 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 LRRC72A6NJI9 287 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 YJEFN3A6XGL0 299 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 E7ENQ6 273 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 SIN3BO75182 1162 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 ASLP04424 464 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 PDIA4P13667 645 aaKnown RBP17.09■□□□□ 0.33
SNF8-205ENST00000507302 ABCB4P21439 1286 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 ACP1P24666 158 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 SLC6A4P31645 630 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 TBC1D25Q3MII6 688 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 EID2Q8N6I1 236 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 KCTD13Q8WZ19 329 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 SEMA4DQ92854 862 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 PAGE5Q96GU1 130 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 FAM129BQ96TA1 746 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 ABCC13Q9NSE7 274 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 EXOC1Q9NV70 894 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 PCDHA7Q9UN72 937 aa17.09■□□□□ 0.33
SNF8-205ENST00000507302 TARSL2A2RTX5 802 aaKnown RBP17.08■□□□□ 0.32
SNF8-205ENST00000507302 CAPN9O14815 690 aa17.08■□□□□ 0.32
SNF8-205ENST00000507302 MID1O15344 667 aa17.08■□□□□ 0.32
SNF8-205ENST00000507302 CALUO43852 315 aaPredicted RBP17.08■□□□□ 0.32
SNF8-205ENST00000507302 BRINP1O60477 761 aa17.08■□□□□ 0.32
SNF8-205ENST00000507302 CKMT2P17540 419 aa17.08■□□□□ 0.32
SNF8-205ENST00000507302 ARRB1P49407 418 aaPredicted RBP17.08■□□□□ 0.32
SNF8-205ENST00000507302 PROX2Q3B8N5 592 aa17.08■□□□□ 0.32
SNF8-205ENST00000507302 PKDCCQ504Y2 493 aa17.08■□□□□ 0.32
SNF8-205ENST00000507302 SPATS2Q86XZ4 545 aaKnown RBP17.08■□□□□ 0.32
SNF8-205ENST00000507302 OXR1Q8N573 874 aa17.08■□□□□ 0.32
SNF8-205ENST00000507302 SERTAD1Q9UHV2 236 aa17.08■□□□□ 0.32
SNF8-205ENST00000507302 A0A1W2PP55 124 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 ERVH48-1M5A8F1 160 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 TLR4O00206 839 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 MSI1O43347 362 aaKnown RBP17.07■□□□□ 0.32
SNF8-205ENST00000507302 RNASEH1O60930 286 aaKnown RBP17.07■□□□□ 0.32
SNF8-205ENST00000507302 GABBR2O75899 941 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 MYL1P05976 194 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 NR2F2P24468 414 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 ACTN2P35609 894 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 SLC8A3P57103 927 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 INSM1Q01101 510 aaPredicted RBP17.07■□□□□ 0.32
SNF8-205ENST00000507302 CFHR1Q03591 330 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 BNIP3Q12983 259 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 KRT39Q6A163 491 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 IQCHQ86VS3 1027 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 SPACA3Q8IXA5 215 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 AADATQ8N5Z0 425 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 MFSD2AQ8NA29 543 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 EDEM1Q92611 657 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 HIC2Q96JB3 615 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 PRICKLE1Q96MT3 831 aaPredicted RBP17.07■□□□□ 0.32
SNF8-205ENST00000507302 CNGB3Q9NQW8 809 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 TSPAN16Q9UKR8 245 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 SSUH2Q9Y2M2 353 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 DOCK9Q9BZ29 2069 aa17.07■□□□□ 0.32
SNF8-205ENST00000507302 TBL1XO60907 577 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 SRPRAP08240 638 aaKnown RBP17.06■□□□□ 0.32
SNF8-205ENST00000507302 GOT1P17174 413 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 SLC8A1P32418 973 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 CSKP41240 450 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 ADPRHP54922 357 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 DAOAP59103 153 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 ADIGQ0VDE8 80 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 BST2Q10589 180 aaKnown RBP17.06■□□□□ 0.32
SNF8-205ENST00000507302 ZCWPW2Q504Y3 356 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 NUGGCQ68CJ6 796 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 NADSYN1Q6IA69 706 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 RFWD3Q6PCD5 774 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 UNC45BQ8IWX7 931 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 FAM186BQ8IYM0 893 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 CCDC150Q8NCX0 1101 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 RNF139Q8WU17 664 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 SNRNP27Q8WVK2 155 aaKnown RBP17.06■□□□□ 0.32
SNF8-205ENST00000507302 TATDN2Q93075 761 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 CLCA2Q9UQC9 943 aa17.06■□□□□ 0.32
SNF8-205ENST00000507302 GOLGA6L7A0A1B0GV03 622 aa17.05■□□□□ 0.32
SNF8-205ENST00000507302 FAM47DPA6NHR8 397 aa17.05■□□□□ 0.32
SNF8-205ENST00000507302 J3QKU1 62 aa17.05■□□□□ 0.32
SNF8-205ENST00000507302 ACSL4O60488 711 aa17.05■□□□□ 0.32
SNF8-205ENST00000507302 RNASEH2AO75792 299 aaKnown RBP17.05■□□□□ 0.32
SNF8-205ENST00000507302 DXOO77932 396 aaKnown RBP17.05■□□□□ 0.32
SNF8-205ENST00000507302 C5AR1P21730 350 aa17.05■□□□□ 0.32
SNF8-205ENST00000507302 GLDCP23378 1020 aa17.05■□□□□ 0.32
SNF8-205ENST00000507302 PSMC2P35998 433 aaKnown RBP17.05■□□□□ 0.32
SNF8-205ENST00000507302 ST8SIA6P61647 398 aa17.05■□□□□ 0.32
SNF8-205ENST00000507302 OVGP1Q12889 678 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms