RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 U3KQA8 63 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 MED13LQ71F56 2210 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 SLC12A8A0AV02 714 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 MUSKO15146 869 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 LZTS3O60299 673 aaPredicted RBP7.54□□□□□ -1.2
VCAN-207ENST00000507162 DIAPH2O60879 1101 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 PIAS2O75928 621 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 STC2O76061 302 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 FAM13AO94988 1023 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 CLDN1O95832 211 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 ATP5BP06576 529 aaKnown RBP7.54□□□□□ -1.2
VCAN-207ENST00000507162 TMEM191BP0C7N4 346 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 JMJD7P0C870 316 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 HARS2P49590 506 aaKnown RBP7.54□□□□□ -1.2
VCAN-207ENST00000507162 KCNMA1Q12791 1236 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 OVGP1Q12889 678 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 TRIM29Q14134 588 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 SPIDRQ14159 915 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 DHX8Q14562 1220 aaKnown RBP7.54□□□□□ -1.2
VCAN-207ENST00000507162 NAA30Q147X3 362 aaPredicted RBP7.54□□□□□ -1.2
VCAN-207ENST00000507162 DRAP1Q14919 205 aaPredicted RBP7.54□□□□□ -1.2
VCAN-207ENST00000507162 CST6Q15828 149 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 MBLAC2Q68D91 279 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 CAPRIN2Q6IMN6 1127 aaKnown RBP7.54□□□□□ -1.2
VCAN-207ENST00000507162 SND1Q7KZF4 910 aaKnown RBP eCLIP7.54□□□□□ -1.22e-6■■■■□ 25.1
VCAN-207ENST00000507162 RUFY3Q7L099 469 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 IQCHQ86VS3 1027 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 DENND1CQ8IV53 801 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 FAM114A1Q8IWE2 563 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 EFCAB3Q8N7B9 438 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 SYT2Q8N9I0 419 aaPredicted RBP7.54□□□□□ -1.2
VCAN-207ENST00000507162 ZSWIM2Q8NEG5 633 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 KCNB2Q92953 911 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 MYOCQ99972 504 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 DUSP23Q9BVJ7 150 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 SLC2A11Q9BYW1 496 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 MTMR12Q9C0I1 747 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 CASS4Q9NQ75 786 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 ABCB8Q9NUT2 735 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 TUBD1Q9UJT1 453 aa7.54□□□□□ -1.2
VCAN-207ENST00000507162 GOLGA8IPA6NC78 632 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 WIPF3A6NGB9 483 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 GOLGA8JA6NMD2 632 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 A8MXQ7 604 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 SCAMP1O15126 338 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 SIN3BO75182 1162 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 TCEA3O75764 348 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 AP1G2O75843 785 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 PRPF6O94906 941 aaKnown RBP7.53□□□□□ -1.2
VCAN-207ENST00000507162 PRKCGP05129 697 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 DLDP09622 509 aaKnown RBP7.53□□□□□ -1.2
VCAN-207ENST00000507162 PLA2G4BP0C869 781 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 GOT1P17174 413 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 POLR2EP19388 210 aaKnown RBP7.53□□□□□ -1.2
VCAN-207ENST00000507162 CORO1AP31146 461 aaKnown RBP7.53□□□□□ -1.2
VCAN-207ENST00000507162 PSMD8P48556 350 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 PSEN1P49768 467 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 ADPRHP54922 357 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 ST8SIA6P61647 398 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 POU5F1Q01860 360 aaKnown RBP7.53□□□□□ -1.2
VCAN-207ENST00000507162 KLRB1Q12918 225 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 PDAP1Q13442 181 aaKnown RBP7.53□□□□□ -1.2
VCAN-207ENST00000507162 POSTNQ15063 836 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 TEX19Q8NA77 164 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 CXorf38Q8TB03 319 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 WFIKKN2Q8TEU8 576 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 SAAL1Q96ER3 474 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 SLC12A9Q9BXP2 914 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 CALN1Q9BXU9 219 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 RAB34Q9BZG1 259 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 STRADBQ9C0K7 418 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 FBXO44Q9H4M3 255 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 PDE11AQ9HCR9 933 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
VCAN-207ENST00000507162 COMMD8Q9NX08 183 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 OSER1Q9NX31 292 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 IL37Q9NZH6 218 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 ARHGAP20Q9P2F6 1191 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 ITGB1BP2Q9UKP3 347 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 AGO1Q9UL18 857 aaKnown RBP7.53□□□□□ -1.2
VCAN-207ENST00000507162 FZD4Q9ULV1 537 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 NME7Q9Y5B8 376 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 CYP46A1Q9Y6A2 500 aa7.53□□□□□ -1.2
VCAN-207ENST00000507162 ATP8B3O60423 1300 aa7.52□□□□□ -1.2
VCAN-207ENST00000507162 HIVEP3Q5T1R4 2406 aa7.52□□□□□ -1.2
VCAN-207ENST00000507162 MYH11P35749 1972 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 PRAMEF33A0A0G2JMD5 474 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 A0A1W2PQH9 124 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 EME2A4GXA9 379 aaPredicted RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 PRR19A6NJB7 356 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 PRAMEF26H0Y7S4 382 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 NVLO15381 856 aaKnown RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 SLC31A1O15431 190 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 LATO43561 262 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 PRAMEF10O60809 474 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 CTDNEP1O95476 244 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 DDAH2O95865 285 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 KRT18P05783 430 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms