RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 RPRD1AQ96P16 312 aaPredicted RBP14.74□□□□□ -0.05
HOXC9-202ENST00000504557 TBCBQ99426 244 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 ADAM33Q9BZ11 813 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 MKRN2Q9H000 416 aaKnown RBP14.74□□□□□ -0.05
HOXC9-202ENST00000504557 MTG2Q9H4K7 406 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 CD248Q9HCU0 757 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 METTL5Q9NRN9 209 aaKnown RBP14.74□□□□□ -0.05
HOXC9-202ENST00000504557 TMPRSS4Q9NRS4 437 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 RXFP3Q9NSD7 469 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 PIGVQ9NUD9 493 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 VANGL2Q9ULK5 521 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 STAP1Q9ULZ2 295 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 SNX10Q9Y5X0 201 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 DOCK4Q8N1I0 1966 aa14.74□□□□□ -0.05
HOXC9-202ENST00000504557 IGHV1OR15-9A0A0B4J2B8 117 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 DCDC2BA2VCK2 349 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 PRR5-ARHGAP8B1AHC4 643 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 NPC1O15118 1278 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 PAGE1O75459 146 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 GJB6O95452 261 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 ZNF806P0C7X5 589 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 ACADMP11310 421 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 PDGFRAP16234 1089 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 FLT3P36888 993 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 CSKP41240 450 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 CTSOP43234 321 aaPredicted RBP14.73□□□□□ -0.05
HOXC9-202ENST00000504557 ATXN1P54253 815 aaKnown RBP14.73□□□□□ -0.05
HOXC9-202ENST00000504557 ARHGAP8P85298 464 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 PUM1Q14671 1186 aaKnown RBP eCLIP14.73□□□□□ -0.05
HOXC9-202ENST00000504557 CDO1Q16878 200 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 RABGAP1LQ5R372 815 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 MPP7Q5T2T1 576 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 OTUD1Q5VV17 481 aaPredicted RBP14.73□□□□□ -0.05
HOXC9-202ENST00000504557 LYSMD4Q5XG99 296 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 FIBINQ8TAL6 211 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 PRCCQ92733 491 aaPredicted RBP14.73□□□□□ -0.05
HOXC9-202ENST00000504557 SIPA1Q96FS4 1042 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 CFAP57Q96MR6 1250 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 ERGIC2Q96RQ1 377 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 TKTL2Q9H0I9 626 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 WDCPQ9H6R7 721 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 VPS45Q9NRW7 570 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 PCDHGA5Q9Y5G8 931 aa14.73□□□□□ -0.05
HOXC9-202ENST00000504557 AP5Z1O43299 807 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 ZNF217O75362 1048 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 MOCS3O95396 460 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 ADCY5O95622 1261 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 DLDP09622 509 aaKnown RBP14.72□□□□□ -0.05
HOXC9-202ENST00000504557 ITPKAP23677 461 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 GABRB2P47870 512 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 IRAK1P51617 712 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 ST8SIA6P61647 398 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 ATP11AP98196 1134 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 AUHQ13825 339 aaKnown RBP14.72□□□□□ -0.05
HOXC9-202ENST00000504557 E2F5Q15329 346 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 PTPRNQ16849 979 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 FILIP1LQ4L180 1135 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 PITRM1Q5JRX3 1037 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 TRNP1Q6NT89 227 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 FBXL22Q6P050 247 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 C14orf80Q86SX3 495 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 ZNF677Q86XU0 584 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 APCDD1Q8J025 514 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 CCAR2Q8N163 923 aaKnown RBP14.72□□□□□ -0.05
HOXC9-202ENST00000504557 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.72□□□□□ -0.05
HOXC9-202ENST00000504557 ZNF397Q8NF99 534 aaPredicted RBP14.72□□□□□ -0.05
HOXC9-202ENST00000504557 IGSF8Q969P0 613 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 RPL10LQ96L21 214 aaKnown RBP14.72□□□□□ -0.05
HOXC9-202ENST00000504557 HSPA12BQ96MM6 686 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 PCDHB18PQ96TA0 734 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 NPY6RQ99463 290 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 BPIFA3Q9BQP9 254 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 INTS6Q9UL03 887 aaKnown RBP14.72□□□□□ -0.05
HOXC9-202ENST00000504557 HS3ST4Q9Y661 456 aa14.72□□□□□ -0.05
HOXC9-202ENST00000504557 LRRC10BA6NIK2 292 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 SERPINC1P01008 464 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 CYP1A1P04798 512 aaPredicted RBP14.71□□□□□ -0.05
HOXC9-202ENST00000504557 CFIP05156 583 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 NSFP46459 744 aaKnown RBP14.71□□□□□ -0.05
HOXC9-202ENST00000504557 COPAP53621 1224 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 EIF4EBP2Q13542 120 aaPredicted RBP14.71□□□□□ -0.05
HOXC9-202ENST00000504557 ENPP2Q13822 863 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 KLHL40Q2TBA0 621 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 PLA2G2CQ5R387 149 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 RNF219Q5W0B1 726 aaPredicted RBP14.71□□□□□ -0.05
HOXC9-202ENST00000504557 SLC36A4Q6YBV0 504 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 KIAA0907Q7Z7F0 614 aaPredicted RBP14.71□□□□□ -0.05
HOXC9-202ENST00000504557 LUZP1Q86V48 1076 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 RGL4Q8IZJ4 473 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 ZNF557Q8N988 423 aaPredicted RBP14.71□□□□□ -0.05
HOXC9-202ENST00000504557 NETO1Q8TDF5 533 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 PRMT1Q99873 361 aaKnown RBP14.71□□□□□ -0.05
HOXC9-202ENST00000504557 EDEM2Q9BV94 578 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 IRX2Q9BZI1 471 aaPredicted RBP14.71□□□□□ -0.05
HOXC9-202ENST00000504557 TMEM245Q9H330 911 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 FSCN3Q9NQT6 498 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 ANLNQ9NQW6 1124 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 TMEM74BQ9NUR3 256 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 RRN3Q9NYV6 651 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 KIAA1522Q9P206 1035 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms