RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 NPHS1O60500 1241 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 MTX2O75431 263 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 TAF5LO75529 589 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 CER1O95813 267 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 TPM1P09493 284 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 CHRM3P20309 590 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 RFC4P35249 363 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 EPHB3P54753 998 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 SESN2P58004 480 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 GMFBP60983 142 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 TTC22Q5TAA0 569 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 AOPEPQ8N6M6 819 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 OR52M1Q8NGK5 317 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 TEX12Q9BXU0 123 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 MS4A7Q9GZW8 240 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 SMARCAD1Q9H4L7 1026 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 ACSS3Q9H6R3 686 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 SCPEP1Q9HB40 452 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 PRR13Q9NZ81 148 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 ATP11BQ9Y2G3 1177 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 MED16Q9Y2X0 877 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 RNF103-CHMP3A0A140T963 221 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 LRRD1A4D1F6 860 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FAM90A18PA6NE21 464 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FAM90A16PA6NEW6 464 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FAM90A9PA6NNJ1 464 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FAM90A5PA8MXJ8 464 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 M0QYT0 321 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 RNF103O00237 685 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 DDAH2O95865 285 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 PNPP00491 289 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FGF4P08620 206 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FAM90A15PP0C7V4 464 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FAM90A14PP0C7W9 464 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 NEFHP12036 1026 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 EEF1DP29692 281 aaKnown RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 SDHAP31040 664 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 ITIH3Q06033 890 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 LMAN2Q12907 356 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 PTP4A2Q12974 167 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 HSP90AA5PQ58FG0 334 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 RAB41Q5JT25 222 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FCRL6Q6DN72 434 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 KIAA0930Q6ICG6 404 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 B3GNT6Q6ZMB0 384 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 MIB1Q86YT6 1006 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 PQLC1Q8N2U9 271 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 HDDC3Q8N4P3 179 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 SLC4A11Q8NBS3 891 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 RNASE8Q8TDE3 154 aaKnown RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 HMGB4Q8WW32 186 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 SYN2Q92777 582 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 TASP1Q9H6P5 420 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 BCAS3Q9H6U6 928 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 SYNDIG1Q9H7V2 258 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 TTC12Q9H892 705 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 DENND3A2RUS2 1198 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 LRRIQ4A6NIV6 560 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 TBKBP1A7MCY6 615 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 F8VZ95 297 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 KRIT1O00522 736 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 GPRIN2O60269 458 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 CCDC172P0C7W6 258 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 CHRNA3P32297 505 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 PTGER3P43115 390 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 PIK3CGP48736 1102 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 CDH8P55286 799 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 RAC3P60763 192 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 FRG1Q14331 258 aaKnown RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 CLPPQ16740 277 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 HSP90AA4PQ58FG1 418 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 MDH1BQ5I0G3 518 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 ZNF280BQ86YH2 543 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 SHISA5Q8N114 240 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 CDYL2Q8N8U2 506 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 RUFY1Q96T51 708 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 VEZTQ9HBM0 779 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 ASH2LQ9UBL3 628 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 MTUS1Q9ULD2 1270 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 KCNH3Q9ULD8 1083 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 PHF24Q9UPV7 400 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 LIPT2A6NK58 231 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 GCATO75600 419 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 SCAF4O95104 1147 aaKnown RBP5.43□□□□□ -1.54
NIPBL-204ENST00000504430 TXNP10599 105 aaKnown RBP5.43□□□□□ -1.54
NIPBL-204ENST00000504430 ARF4P18085 180 aaPredicted RBP5.43□□□□□ -1.54
NIPBL-204ENST00000504430 ALDH1B1P30837 517 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 GRK5P34947 590 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 MAGEA8P43361 318 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 CLCNKAP51800 687 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 RIPK1Q13546 671 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 TUBB2AQ13885 445 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 PCLAFQ15004 111 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 ZNF792Q3KQV3 632 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 CCDC122Q5T0U0 273 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 AKNAD1Q5T1N1 836 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 SFRP5Q5T4F7 317 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 NME9Q86XW9 330 aa5.43□□□□□ -1.54
NIPBL-204ENST00000504430 KIAA2013Q8IYS2 634 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms