RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 C17orf53Q8N3J3 647 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 CARNMT1Q8N4J0 409 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 HJURPQ8NCD3 748 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 C1orf74Q96LT6 269 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 IRX2Q9BZI1 471 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 TSGA10Q9BZW7 698 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 MARK1Q9P0L2 795 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 DRGXA6NNA5 263 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 KRT86O43790 486 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 TULP3O75386 442 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 PDGFBP01127 241 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 CD48P09326 243 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 SLC1A1P43005 524 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 MARCKSL1P49006 195 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 MMRN1Q13201 1228 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 FSCBQ5H9T9 825 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 RABGAP1LQ5R372 815 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 MANEALQ5VSG8 457 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 C11orf63Q6NUN7 778 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 LRRC31Q6UY01 552 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 TFAP2DQ7Z6R9 452 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 ETFBKMTQ8IXQ9 262 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 CCAR2Q8N163 923 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 LRRC57Q8N9N7 239 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 KIAA1524Q8TCG1 905 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 EDAQ92838 391 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 NCAPGQ9BPX3 1015 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 C8orf33Q9H7E9 229 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 DNAJC17Q9NVM6 304 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 TMEM51Q9NW97 253 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 WNT16Q9UBV4 365 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 LCMT1Q9UIC8 334 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 NDRG2Q9UN36 371 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 PACSIN2Q9UNF0 486 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 NEU3Q9UQ49 428 aa13.68□□□□□ -0.22
PDLIM7-212ENST00000504380 IGLV3-10A0A075B6K4 115 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 EEF2KO00418 725 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 STK25O00506 426 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 CACNG3O60359 315 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 CISD3P0C7P0 127 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 GOT1P17174 413 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 AIF1P55008 147 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 CDH6P55285 790 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 SEMA3BQ13214 749 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 MTA1Q13330 715 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 KRT81Q14533 505 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 C5orf22Q49AR2 442 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 ZNF662Q6ZS27 426 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 RALGPS2Q86X27 583 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 NETO2Q8NC67 525 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 OR52K2Q8NGK3 314 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 TEKT4Q8WW24 435 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 FAM3CQ92520 227 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 RAPGEF5Q92565 580 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 KRT35Q92764 455 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 CD101Q93033 1021 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 TBC1D31Q96DN5 1066 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 XPO6Q96QU8 1125 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 FOXQ1Q9C009 403 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 PCDH18Q9HCL0 1135 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 CWC15Q9P013 229 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 MTF2Q9Y483 593 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 MFHAS1Q9Y4C4 1052 aa13.67□□□□□ -0.22
PDLIM7-212ENST00000504380 H0Y626 953 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 LUC7L3O95232 432 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 KRT1P04264 644 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 AMPD1P23109 780 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 EPHB2P29323 1055 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 CD70P32970 193 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 DGKGP49619 791 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 DNA2P51530 1060 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 ARSEP51690 589 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 TPI1P60174 286 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 NRG1Q02297 640 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 SIGLEC14Q08ET2 396 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 LMAN2Q12907 356 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 LLGL1Q15334 1064 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 GRAMD4Q6IC98 578 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 FSTL4Q6MZW2 842 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 TRIM67Q6ZTA4 783 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 NT5DC3Q86UY8 548 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 MFN1Q8IWA4 741 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 PHTF2Q8N3S3 785 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 RNF10Q8N5U6 811 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 KCTD6Q8NC69 237 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 EZH1Q92800 747 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 EPAS1Q99814 870 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 P2RY13Q9BPV8 354 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 ZYG11BQ9C0D3 744 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 TBC1D17Q9HA65 648 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 RBM12Q9NTZ6 932 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms