RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 BTN2A3PQ96KV6 586 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 SYNCQ9H7C4 482 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 KIAA1522Q9P206 1035 aaPredicted RBP12.39□□□□□ -0.43
MED28-203ENST00000503945 USP36Q9P275 1121 aaKnown RBP12.39□□□□□ -0.43
MED28-203ENST00000503945 CYTH4Q9UIA0 394 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 KLK13Q9UKR3 277 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 PCDHGC3Q9UN70 934 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 NFE2L3Q9Y4A8 694 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 NEUROG3Q9Y4Z2 214 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 CEP83Q9Y592 693 aa12.39□□□□□ -0.43
MED28-203ENST00000503945 PCDH15Q96QU1 1955 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 METTL12A8MUP2 240 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 MEI4A8MW99 385 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 KCNU1A8MYU2 1149 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 UPK3BL1B0FP48 263 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 KCNJ18B7U540 433 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 UPK3BL2E5RIL1 263 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 OPHN1O60890 802 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 CCR1P32246 355 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 CLCN1P35523 988 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 COPAP53621 1224 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 RPS24P62847 133 aaKnown RBP12.38□□□□□ -0.43
MED28-203ENST00000503945 SIM1P81133 766 aaPredicted RBP12.38□□□□□ -0.43
MED28-203ENST00000503945 ZBTB16Q05516 673 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 SFSWAPQ12872 951 aaKnown RBP12.38□□□□□ -0.43
MED28-203ENST00000503945 MTA1Q13330 715 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 CDH18Q13634 790 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 COL9A2Q14055 689 aaPredicted RBP12.38□□□□□ -0.43
MED28-203ENST00000503945 TAF5Q15542 800 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 PTPRNQ16849 979 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 OR6B2Q6IFH4 312 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 C11orf57Q6ZUT1 292 aaPredicted RBP12.38□□□□□ -0.43
MED28-203ENST00000503945 FAM124AQ86V42 546 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 LGI2Q8N0V4 545 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 DEFB106AQ8N104 65 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 OR2I1PQ8NGU4 316 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 DNASE2BQ8WZ79 361 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 FBRSQ9HAH7 460 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 CAPN10Q9HC96 672 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 PRSS16Q9NQE7 514 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 ASNSD1Q9NWL6 643 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 NCKAP1Q9Y2A7 1128 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 MSRB2Q9Y3D2 182 aa12.38□□□□□ -0.43
MED28-203ENST00000503945 A0A1B0GTW7 788 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 F5H5T6 163 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 RNASEH1O60930 286 aaKnown RBP12.37□□□□□ -0.43
MED28-203ENST00000503945 HSF2BPO75031 334 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 IGLV3-19P01714 112 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 DNTTP04053 509 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 ASLP04424 464 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 TACR2P21452 398 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
MED28-203ENST00000503945 NNMTP40261 264 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 SLC6A3Q01959 620 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 KCNJ12Q14500 433 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 DPCR1Q3MIW9 517 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 HSP90AA4PQ58FG1 418 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 DCAF12L1Q5VU92 463 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 TAC4Q86UU9 113 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 SLC47A2Q86VL8 602 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 PASD1Q8IV76 773 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 FAM71AQ8IYT1 594 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 CHCHD4Q8N4Q1 142 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 ZNF366Q8N895 744 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 ZCCHC14Q8WYQ9 949 aaKnown RBP12.37□□□□□ -0.43
MED28-203ENST00000503945 CPXM1Q96SM3 734 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 NUCKS1Q9H1E3 243 aaKnown RBP12.37□□□□□ -0.43
MED28-203ENST00000503945 MIR1-1HGQ9H1L0 117 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 FAM204AQ9H8W3 233 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 CD93Q9NPY3 652 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 BAHCC1Q9P281 2608 aa12.37□□□□□ -0.43
MED28-203ENST00000503945 SPEGQ15772 3267 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 TAF4O00268 1085 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 BCAT2O15382 392 aaPredicted RBP12.36□□□□□ -0.43
MED28-203ENST00000503945 GRAP2O75791 330 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 LUC7L3O95232 432 aaKnown RBP12.36□□□□□ -0.43
MED28-203ENST00000503945 TPM2P07951 284 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 SRPRAP08240 638 aaKnown RBP12.36□□□□□ -0.43
MED28-203ENST00000503945 CD59P13987 128 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 CSKP41240 450 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 OXCT1P55809 520 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 SLC14A1Q13336 389 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 SLC12A1Q13621 1099 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 RAPGEF1Q13905 1077 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 DRAP1Q14919 205 aaPredicted RBP12.36□□□□□ -0.43
MED28-203ENST00000503945 TCP11X2Q5H9J9 407 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 FSCBQ5H9T9 825 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 KLHDC7AQ5VTJ3 777 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 RNF219Q5W0B1 726 aaPredicted RBP12.36□□□□□ -0.43
MED28-203ENST00000503945 RAP1GAP2Q684P5 730 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 CLEC17AQ6ZS10 378 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 CHSY1Q86X52 802 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 ZDHHC17Q8IUH5 632 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 MINDY1Q8N5J2 469 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 KDM1BQ8NB78 822 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 TMEM35BQ8NCS4 154 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms