RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 C16orf89Q6UX73 402 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 DOK3Q7L591 496 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 TMPRSS9Q7Z410 1059 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 ZNF804AQ7Z570 1209 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 TBC1D3Q8IZP1 549 aaPredicted RBP5.71□□□□□ -1.5
GYPA-203ENST00000503627 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.71□□□□□ -1.5
GYPA-203ENST00000503627 IL17RCQ8NAC3 791 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 CLEC4CQ8WTT0 213 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 OVCA2Q8WZ82 227 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 POMGNT1Q8WZA1 660 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 RABGGTAQ92696 567 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 PTP4A1Q93096 173 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 RMDN1Q96DB5 314 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 EIF3CQ99613 913 aaKnown RBP5.71□□□□□ -1.5
GYPA-203ENST00000503627 NPAS1Q99742 590 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 DNAI2Q9GZS0 605 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 ST6GALNAC4Q9H4F1 302 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 POLR1BQ9H9Y6 1135 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 PDE11AQ9HCR9 933 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 PAK6Q9NQU5 681 aaPredicted RBP5.71□□□□□ -1.5
GYPA-203ENST00000503627 THAP1Q9NVV9 213 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 CTTNBP2NLQ9P2B4 639 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 CDH22Q9UJ99 828 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 SLC12A4Q9UP95 1085 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 TRPV2Q9Y5S1 764 aa5.71□□□□□ -1.5
GYPA-203ENST00000503627 FER1L4A9Z1Z3 1794 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 CCDC195A0A1B0GUA6 201 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 UBE2QL1A1L167 161 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 PER2O15055 1255 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 IPO8O15397 1037 aaKnown RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 HNRNPCL1O60812 293 aaKnown RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 PSMD10O75832 226 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 C22orf31O95567 290 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 RNASE1P07998 156 aaKnown RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 MYBL1P10243 752 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 ATF7P17544 494 aaPredicted RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 GABRB1P18505 474 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 SCP2P22307 547 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 GCSHP23434 173 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 IGFBP6P24592 240 aaPredicted RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 AVPR2P30518 371 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 MRPL12P52815 198 aaKnown RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 MVDP53602 400 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 PRAMEP78395 509 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 EFNB1P98172 346 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 CEBPZQ03701 1054 aaKnown RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 ZNF844Q08AG5 666 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 ABHD18Q0P651 414 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 E2F2Q14209 437 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 USP10Q14694 798 aaKnown RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 RUNDC3AQ59EK9 446 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 ZNF667Q5HYK9 610 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 C9orf152Q5JTZ5 239 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 CCDC158Q5M9N0 1113 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 IYDQ6PHW0 289 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 SARM1Q6SZW1 724 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 USP51Q70EK9 711 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 SYNE4Q8N205 404 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 ZNF619Q8N2I2 560 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 CHST13Q8NET6 341 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 ZNF483Q8TF39 744 aaPredicted RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 ZBTB8AQ96BR9 441 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 MARS2Q96GW9 593 aaKnown RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 FAR2Q96K12 515 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 PKNOX2Q96KN3 472 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 KLHL15Q96M94 604 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 FIZ1Q96SL8 496 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 CITED2Q99967 270 aaPredicted RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 VN1R3Q9BXE9 311 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 SLC32A1Q9H598 525 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 CXorf56Q9H5V9 222 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 ZNF552Q9H707 407 aaPredicted RBP5.7□□□□□ -1.5
GYPA-203ENST00000503627 SH2D4AQ9H788 454 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.7□□□□□ -1.5
GYPA-203ENST00000503627 ARHGEF3Q9NR81 526 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 SNX15Q9NRS6 342 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 PDRG1Q9NUG6 133 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 DNAJB9Q9UBS3 223 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 SSX2IPQ9Y2D8 614 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 CAPN7Q9Y6W3 813 aa5.7□□□□□ -1.5
GYPA-203ENST00000503627 hCG_1809904A0A1W2PP81 198 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 A0A1W2PPE2 198 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 A0A1W2PR64 198 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 DRGXA6NNA5 263 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 INO80B-WBP1J3KQ70 363 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 CTDSP2O14595 271 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 SYNCRIPO60506 623 aaKnown RBP5.69□□□□□ -1.5
GYPA-203ENST00000503627 SUN1O94901 812 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 SPATA31D3P0C874 917 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 ITGALP20701 1170 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 CPT2P23786 658 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 HPDP32754 393 aaPredicted RBP5.69□□□□□ -1.5
GYPA-203ENST00000503627 KIF5BP33176 963 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 HNF1BP35680 557 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 CPOXP36551 454 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 BMPR1AP36894 532 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 LMAN1P49257 510 aa5.69□□□□□ -1.5
GYPA-203ENST00000503627 RRP1P56182 461 aaKnown RBP5.69□□□□□ -1.5
GYPA-203ENST00000503627 TIRAPP58753 221 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms