RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NEU3Q9UQ49 428 aa22.63■■□□□ 1.21
PTPN13-205ENST00000502971 EXOC1LA0A1B0GW35 172 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 GPX6P59796 221 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 IFI35P80217 286 aaPredicted RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 COG7P83436 770 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 ZNF33AQ06730 810 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 WASHC5Q12768 1159 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 TAOK1Q7L7X3 1001 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 TDRPQ86YL5 185 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 LZTR1Q8N653 840 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 COLGALT1Q8NBJ5 622 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 NETO2Q8NC67 525 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 CLSTN3Q9BQT9 956 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 WDR83Q9BRX9 315 aaKnown RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 FETUBQ9UGM5 382 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 SLC12A6Q9UHW9 1150 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 CLUHO75153 1309 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 RPL17P18621 184 aaKnown RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 ATF6P18850 670 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 GARSP41250 739 aaKnown RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 MLLT6P55198 1093 aaPredicted RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 GNGT1P63211 74 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 SARNPP82979 210 aaKnown RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 EFEMP1Q12805 493 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 TRIP4Q15650 581 aaPredicted RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 PARP6Q2NL67 630 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 RASIP1Q5U651 963 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 TPGS2Q68CL5 300 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 FAM117BQ6P1L5 589 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 TP53INP2Q8IXH6 220 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 C7orf61Q8IZ16 206 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 GIPC2Q8TF65 315 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 LRRC39Q96DD0 335 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 UBE2OQ9C0C9 1292 aaKnown RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 EIF2B3Q9NR50 452 aaKnown RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 SPG21Q9NZD8 308 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 IGSF9Q9P2J2 1179 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 HS3ST4Q9Y661 456 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 MRPL42Q9Y6G3 142 aaKnown RBP22.62■■□□□ 1.21
PTPN13-205ENST00000502971 TEX264Q9Y6I9 313 aa22.62■■□□□ 1.21
PTPN13-205ENST00000502971 ALPK3Q96L96 1907 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 SPAG6O75602 509 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 ABLIM3O94929 683 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 APOEP02649 317 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 MDH1P40925 334 aaKnown RBP22.61■■□□□ 1.21
PTPN13-205ENST00000502971 ELK3P41970 407 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 SYCP2LQ5T4T6 812 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 ACBD5Q5T8D3 534 aaPredicted RBP22.61■■□□□ 1.21
PTPN13-205ENST00000502971 C3orf62Q6ZUJ4 267 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 CAND1Q86VP6 1230 aaKnown RBP22.61■■□□□ 1.21
PTPN13-205ENST00000502971 ZNF276Q8N554 614 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 ATP6V0D2Q8N8Y2 350 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 ZNF461Q8TAF7 563 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 OVCA2Q8WZ82 227 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 CDK5RAP1Q96SZ6 601 aaKnown RBP22.61■■□□□ 1.21
PTPN13-205ENST00000502971 XAB2Q9HCS7 855 aaKnown RBP22.61■■□□□ 1.21
PTPN13-205ENST00000502971 SEPT10Q9P0V9 454 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 NR2E3Q9Y5X4 410 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 GREB1Q4ZG55 1949 aa22.61■■□□□ 1.21
PTPN13-205ENST00000502971 CCDC85CA6NKD9 419 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 E9PAM4 449 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 C2CD2LO14523 706 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 MOCS2O96007 188 aaPredicted RBP22.6■■□□□ 1.21
PTPN13-205ENST00000502971 IRAK1P51617 712 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 FPGSQ05932 587 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 MTA1Q13330 715 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 RASA2Q15283 850 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 C10orf120Q5SQS8 335 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 FAM182AQ5T1J6 154 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 TMCO2Q7Z6W1 182 aaPredicted RBP22.6■■□□□ 1.21
PTPN13-205ENST00000502971 DDX53Q86TM3 631 aaKnown RBP22.6■■□□□ 1.21
PTPN13-205ENST00000502971 ZNF567Q8N184 647 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 VAT1Q99536 393 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 EURLQ9NYK6 297 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 MARCH2Q9P0N8 246 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 FNIP2Q9P278 1114 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 SLC24A2Q9UI40 661 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 PTPN3P26045 913 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 SSTR1P30872 391 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 MAGEA3P43357 314 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 MMP13P45452 471 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 KPNA1P52294 538 aaPredicted RBP22.6■■□□□ 1.21
PTPN13-205ENST00000502971 ARTNQ5T4W7 220 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 PDZD8Q8NEN9 1154 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 RABGEF1Q9UJ41 708 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 TRHDEQ9UKU6 1024 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 CHMP2BQ9UQN3 213 aa22.6■■□□□ 1.21
PTPN13-205ENST00000502971 WASH4PA8MWX3 477 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 ACRP10323 421 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 MLNP12872 115 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 TUBP50607 506 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 RING1Q06587 406 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 KLHL38Q2WGJ6 581 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 CAPN12Q6ZSI9 719 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 ZNF771Q7L3S4 317 aaPredicted RBP22.59■■□□□ 1.21
PTPN13-205ENST00000502971 PID1Q7Z2X4 250 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 TADA2BQ86TJ2 420 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 ARHGEF2Q92974 986 aaKnown RBP22.59■■□□□ 1.21
PTPN13-205ENST00000502971 BTN2A3PQ96KV6 586 aa22.59■■□□□ 1.21
PTPN13-205ENST00000502971 KLHL8Q9P2G9 620 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms