RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 C2CD4BA6NLJ0 364 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 SYNCRIPO60506 623 aaKnown RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 ENDOD1O94919 500 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 GJB6O95452 261 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 GZMAP12544 262 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 GPD1P21695 349 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 RFC1P35251 1148 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 ZBED6P86452 979 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 LMAN2Q12907 356 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 ZNF177Q13360 481 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 BYSLQ13895 437 aaKnown RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 CDO1Q16878 200 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 CCDC14Q49A88 953 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 FSCBQ5H9T9 825 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 ACBD5Q5T8D3 534 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 TTC39BQ5VTQ0 682 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 LAIR1Q6GTX8 287 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 DNAJC24Q6P3W2 148 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 WDR59Q6PJI9 974 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 SERPINA13PQ6UXR4 307 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 LRRC31Q6UY01 552 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 ZNF571Q7Z3V5 609 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 MCOLN2Q8IZK6 566 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 CCAR2Q8N163 923 aaKnown RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 DCLK2Q8N568 766 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 CYB5D2Q8WUJ1 264 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 SYN2Q92777 582 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 IGSF8Q969P0 613 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 ERLEC1Q96DZ1 483 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 VCPIP1Q96JH7 1222 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 C1orf74Q96LT6 269 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 PPP1R9BQ96SB3 815 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 SYT11Q9BT88 431 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 BZW2Q9Y6E2 419 aaKnown RBP13.22□□□□□ -0.29
HSPG2-213ENST00000498495 CACNA1HO95180 2353 aa13.22□□□□□ -0.29
HSPG2-213ENST00000498495 MYO18AQ92614 2054 aaKnown RBP13.21□□□□□ -0.29
HSPG2-213ENST00000498495 A0A1B0GVM2 712 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 TCAF2A6NFQ2 919 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 DCLK1O15075 740 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 FTLP02792 175 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-213ENST00000498495 EPHX1P07099 455 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 DLDP09622 509 aaKnown RBP13.21□□□□□ -0.29
HSPG2-213ENST00000498495 GABRG2P18507 467 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 RRM1P23921 792 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 PTPN9P43378 593 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 OXCT1P55809 520 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 SLC12A1Q13621 1099 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 ENPP2Q13822 863 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 C15orf59Q2T9L4 293 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-213ENST00000498495 ARL13BQ3SXY8 428 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 FNDC3BQ53EP0 1204 aaKnown RBP13.21□□□□□ -0.29
HSPG2-213ENST00000498495 E4F1Q66K89 784 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-213ENST00000498495 KIAA1211LQ6NV74 962 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 STRADAQ7RTN6 431 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 BNIPLQ7Z465 357 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 C14orf80Q86SX3 495 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 KBTBD6Q86V97 674 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 C11orf74Q86VG3 221 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 FAM131BQ86XD5 332 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 FAM160A2Q8N612 972 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-213ENST00000498495 LMLNQ96KR4 655 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 HAPLN3Q96S86 360 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.21□□□□□ -0.29
HSPG2-213ENST00000498495 ANLNQ9NQW6 1124 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 TAS2R14Q9NYV8 317 aa13.21□□□□□ -0.29
HSPG2-213ENST00000498495 ITIH6Q6UXX5 1313 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.3
HSPG2-213ENST00000498495 MAP3K13O43283 966 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 SRGAP2O75044 1071 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 RTN2O75298 545 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 CLDN11O75508 207 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 RHOBTB1O94844 696 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 ASLP04424 464 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 SERPING1P05155 500 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 RETP07949 1114 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 DESP17661 470 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 CASP14P31944 242 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 GGCXP38435 758 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 CSKP41240 450 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 CDH4P55283 916 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 FUT11Q495W5 492 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 C5orf22Q49AR2 442 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
HSPG2-213ENST00000498495 PITRM1Q5JRX3 1037 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 SH3PXD2AQ5TCZ1 1133 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 CIR1Q86X95 450 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-213ENST00000498495 OLIG1Q8TAK6 271 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 RLN3Q8WXF3 142 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 TTC17Q96AE7 1141 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 ZC3H10Q96K80 434 aaKnown RBP13.2□□□□□ -0.3
HSPG2-213ENST00000498495 SPACA7Q96KW9 195 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 TMPRSS4Q9NRS4 437 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 PARVAQ9NVD7 372 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 SUN2Q9UH99 717 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms