RNA–Protein interactions for RNA: ENST00000497622.1

FAM3C-205, Transcript of family with sequence similarity 3 member C, human

TSL 2

Gene FAM3C, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3C-205	ENST00000497622	CNTN5	O94779	1100 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	EGR1	P18146	543 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	SLC37A1	P57057	533 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	CSHL1	Q14406	222 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	HSP90AB2P	Q58FF8	381 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	KIAA1755	Q5JYT7	1200 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622		Q5PR19	223 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	NADSYN1	Q6IA69	706 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	CYB5RL	Q6IPT4	315 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	WDR93	Q6P2C0	686 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	C16orf89	Q6UX73	402 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	USP43	Q70EL4	1123 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	MORC1	Q86VD1	984 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	SFXN1	Q9H9B4	322 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	SPAG4	Q9NPE6	437 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	CD93	Q9NPY3	652 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	TNFSF13B	Q9Y275	285 aa		4.24	□□□□□ -1.73
FAM3C-205	ENST00000497622	NOTCH4	Q99466	2003 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	FOXO6	A8MYZ6	492 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	APOL1	O14791	398 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	CYP1A2	P05177	515 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	PECAM1	P16284	738 aa	Predicted RBP	4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	ATF3	P18847	181 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	RRP1	P56182	461 aa	Known RBP	4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	DSCR9	P59020	149 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	GALE	Q14376	348 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	KRTAP27-1	Q3LI81	207 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	C9orf50	Q5SZB4	431 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622		Q6ZTK2	550 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	NR2C2AP	Q86WQ0	139 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	RASGRP3	Q8IV61	690 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	DNASE2B	Q8WZ79	361 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	COLEC11	Q9BWP8	271 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	GJB4	Q9NTQ9	266 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	TBC1D14	Q9P2M4	693 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	MAN2B2	Q9Y2E5	1009 aa		4.23	□□□□□ -1.73
FAM3C-205	ENST00000497622	PNMA6E	A0A0J9YXQ4	647 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622		A0A0U1RQG5	324 aa	Predicted RBP	4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	NDST3	O95803	873 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	GABRB3	P28472	473 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	DEK	P35659	375 aa	Known RBP	4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	STT3A	P46977	705 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	GAS1	P54826	345 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	RPL36A	P83881	106 aa	Known RBP	4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	PMPCA	Q10713	525 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	MAPKAPK3	Q16644	382 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	INO80D	Q53TQ3	878 aa	Predicted RBP	4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	C10orf76	Q5T2E6	689 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	CCDC181	Q5TID7	509 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	ASPHD1	Q5U4P2	390 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	CTU1	Q7Z7A3	348 aa	Known RBP	4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	TXLNB	Q8N3L3	684 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	RNF152	Q8N8N0	203 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	NPIPB3	Q92617	1050 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	PHF21B	Q96EK2	531 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	C8orf48	Q96LL4	319 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	POLR3GL	Q9BT43	218 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	TM6SF1	Q9BZW5	370 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	DCLK3	Q9C098	648 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	CDT1	Q9H211	546 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	MAP6D1	Q9H9H5	199 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	PLAC1	Q9HBJ0	212 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	NCKIPSD	Q9NZQ3	722 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	MDFIC	Q9P1T7	246 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622	LMTK3	Q96Q04	1460 aa		4.22	□□□□□ -1.73
FAM3C-205	ENST00000497622		A0A1W2PPC4	97 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622		J3KTA2	159 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	PODXL	O00592	558 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	KAT7	O95251	611 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	LCK	P06239	509 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	TSHR	P16473	764 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	HOXD3	P31249	432 aa	Predicted RBP	4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	RASSF2	P50749	326 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	CASP5	P51878	434 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	TBX4	P57082	545 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	GALNT3	Q14435	633 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	ARL13B	Q3SXY8	428 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	MSANTD2	Q6P1R3	559 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	SLC16A12	Q6ZSM3	486 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	GPSM1	Q86YR5	675 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	PRR26	Q8N8Z3	221 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	TIFA	Q96CG3	184 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	CCDC136	Q96JN2	1154 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	PAAF1	Q9BRP4	392 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	HELLS	Q9NRZ9	838 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	SLC52A1	Q9NWF4	448 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	RGL1	Q9NZL6	768 aa		4.21	□□□□□ -1.74
FAM3C-205	ENST00000497622	KIF3B	O15066	747 aa		4.2	□□□□□ -1.74
FAM3C-205	ENST00000497622	MSI1	O43347	362 aa	Known RBP	4.2	□□□□□ -1.74
FAM3C-205	ENST00000497622	PCYT1A	P49585	367 aa		4.2	□□□□□ -1.74
FAM3C-205	ENST00000497622	SHC2	P98077	582 aa		4.2	□□□□□ -1.74
FAM3C-205	ENST00000497622	CRYZ	Q08257	329 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms