RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 SETD3Q86TU7 594 aaPredicted RBP20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 NLRP14Q86W24 1093 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 LRRC49Q8IUZ0 686 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 LGI2Q8N0V4 545 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 RPRD1AQ96P16 312 aaPredicted RBP20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 CSPG4P5Q96PW8 444 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 RNF157Q96PX1 679 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 WDR24Q96S15 920 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 TUBB2BQ9BVA1 445 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 PRDM6Q9NQX0 595 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 ZNF212Q9UDV6 495 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 LIMD1Q9UGP4 676 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 SNX12Q9UMY4 172 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 TBC1D30Q9Y2I9 924 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 REV3LO60673 3130 aa20.35■□□□□ 0.85
SCAMP3-209ENST00000497470 ESPNB1AK53 854 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 FAM72CH0Y354 149 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 CACNG3O60359 315 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 ZNF189O75820 626 aaPredicted RBP20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 EPHB2P29323 1055 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 YBEYP58557 167 aaPredicted RBP20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 TDGQ13569 410 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 RUNX3Q13761 415 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 FAM72AQ5TYM5 149 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 FYB2Q5VWT5 728 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 SLC9A4Q6AI14 798 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 FAM72DQ6L9T8 149 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 SPOCD1Q6ZMY3 1216 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 C14orf80Q86SX3 495 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 FAM72BQ86X60 149 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 SUGP1Q8IWZ8 645 aaKnown RBP20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 UMODL1-AS1Q8N2C9 162 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 PYROXD2Q8N2H3 581 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 RTL3Q8N8U3 475 aaKnown RBP20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 MAIP1Q8WWC4 291 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 EXOC4Q96A65 974 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 KXD1Q9BQD3 176 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 LINC00597Q9H2U6 94 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 ECT2Q9H8V3 914 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 TMPRSS4Q9NRS4 437 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 VANGL2Q9ULK5 521 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 WNT6Q9Y6F9 365 aa20.34■□□□□ 0.85
SCAMP3-209ENST00000497470 SERPINB6P35237 376 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 ETFBP38117 255 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 MARCKSL1P49006 195 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 PAFAH1B3Q15102 231 aaKnown RBP20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 ITPRIPL2Q3MIP1 535 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 ANKRD20A8PQ5CZ79 823 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 PPP6R3Q5H9R7 873 aaPredicted RBP20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 ZFYVE27Q5T4F4 411 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 BZW1Q7L1Q6 419 aaKnown RBP20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 C17orf53Q8N3J3 647 aaPredicted RBP20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 RASGEF1CQ8N431 466 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 FIBINQ8TAL6 211 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 IGSF8Q969P0 613 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 PRICKLE1Q96MT3 831 aaPredicted RBP20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 CALN1Q9BXU9 219 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 MAK16Q9BXY0 300 aaKnown RBP20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 C8orf33Q9H7E9 229 aaPredicted RBP20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 BRD9Q9H8M2 597 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 HPS4Q9NQG7 708 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 ARHGEF4Q9NR80 690 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 GPATCH2LQ9NWQ4 482 aa20.33■□□□□ 0.85
SCAMP3-209ENST00000497470 DOCK4Q8N1I0 1966 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 hCG_1818297A0A087WSY0 165 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 GOLGA6L7A0A1B0GV03 622 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 DCLK1O15075 740 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 NCAM2O15394 837 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 CREB3O43889 395 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 TJP3O95049 919 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 CYP17A1P05093 508 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 PYGMP11217 842 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 SRFP11831 508 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 GOT1P17174 413 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 HOXD9P28356 352 aaPredicted RBP20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 GDI1P31150 447 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 CASQ1P31415 396 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 NR2C2P49116 596 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 NDST2P52849 883 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 PLK1P53350 603 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 ZNF33AQ06730 810 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 DMC1Q14565 340 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 LY6G5CQ5SRR4 150 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 SEL1L2Q5TEA6 688 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 MFSD7Q6UXD7 560 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 BBS12Q6ZW61 710 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 TMEM25Q86YD3 366 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 CCDC117Q8IWD4 279 aaPredicted RBP20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 ASIC4Q96FT7 647 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 XPO6Q96QU8 1125 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 NAP1L3Q99457 506 aaPredicted RBP20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 RPP25Q9BUL9 199 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 FRMD8P1Q9BZ68 369 aaPredicted RBP20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 OSBPL8Q9BZF1 889 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 PACSIN2Q9UNF0 486 aaPredicted RBP20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 SLC27A6Q9Y2P4 619 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 SAR1BQ9Y6B6 198 aa20.32■□□□□ 0.84
SCAMP3-209ENST00000497470 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.31■□□□□ 0.84
SCAMP3-209ENST00000497470 ILVBLA1L0T0 632 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms