RNA–Protein interactions for RNA: ENST00000496908.5

MECP2-211, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-211ENST00000496908 ERBB2P04626 1255 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 CD59P13987 128 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 TACR2P21452 398 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 CLCN1P35523 988 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 NUMBP49757 651 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 FAM193AP78312 1265 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 BNC1Q01954 994 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 GRIK2Q13002 908 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 CDH18Q13634 790 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
MECP2-211ENST00000496908 PTPN20Q4JDL3 420 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 PITRM1Q5JRX3 1037 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 OLFML1Q6UWY5 402 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 FAM183BPQ6ZVS7 135 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 CHSY1Q86X52 802 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 CIR1Q86X95 450 aaPredicted RBP14.33□□□□□ -0.12
MECP2-211ENST00000496908 DEFB106AQ8N104 65 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 C1orf216Q8TAB5 229 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 PPP1R13BQ96KQ4 1090 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 PRMT1Q99873 361 aaKnown RBP14.33□□□□□ -0.12
MECP2-211ENST00000496908 TRIM62Q9BVG3 475 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 MIR1-1HGQ9H1L0 117 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 NDST4Q9H3R1 872 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 C6orf106Q9H6K1 298 aaPredicted RBP14.33□□□□□ -0.12
MECP2-211ENST00000496908 PLCB1Q9NQ66 1216 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 SUSD2Q9UGT4 822 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 EIF2B4Q9UI10 523 aaKnown RBP14.33□□□□□ -0.12
MECP2-211ENST00000496908 NFE2L3Q9Y4A8 694 aa14.33□□□□□ -0.12
MECP2-211ENST00000496908 NYNRINQ9P2P1 1898 aaKnown RBP14.32□□□□□ -0.12
MECP2-211ENST00000496908 SYNJ2BP-COX16A0A087WUM0 186 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 A0A1B0GTW7 788 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 TYW5A2RUC4 315 aaKnown RBP14.32□□□□□ -0.12
MECP2-211ENST00000496908 KCNU1A8MYU2 1149 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 SIN3BO75182 1162 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 KRT37O76014 449 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 SYPP08247 313 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 GNSP15586 552 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 KCNMA1Q12791 1236 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 VWA3BQ502W6 1294 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 OTUD1Q5VV17 481 aaPredicted RBP14.32□□□□□ -0.12
MECP2-211ENST00000496908 FAM71AQ8IYT1 594 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 APCDD1Q8J025 514 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 HDDC3Q8N4P3 179 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 ZNF557Q8N988 423 aaPredicted RBP14.32□□□□□ -0.12
MECP2-211ENST00000496908 BTN2A3PQ96KV6 586 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 TUBGCP2Q9BSJ2 902 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 ADAM33Q9BZ11 813 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 NUP62CLQ9H1M0 184 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 FAM204AQ9H8W3 233 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 FBRSQ9HAH7 460 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 SAMSN1Q9NSI8 373 aaKnown RBP14.32□□□□□ -0.12
MECP2-211ENST00000496908 ASNSD1Q9NWL6 643 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 DDIT4Q9NX09 232 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 COX16Q9P0S2 106 aa14.32□□□□□ -0.12
MECP2-211ENST00000496908 FAM170AA1A519 330 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 H0Y626 953 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 HSF2BPO75031 334 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 ASLP04424 464 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 GLI1P08151 1106 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
MECP2-211ENST00000496908 ERCC5P28715 1186 aaPredicted RBP14.31□□□□□ -0.12
MECP2-211ENST00000496908 IRAK1P51617 712 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 PTK2Q05397 1052 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 ST3GAL2Q16842 350 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 HNRNPA1L2Q32P51 320 aaKnown RBP14.31□□□□□ -0.12
MECP2-211ENST00000496908 ZNF776Q68DI1 518 aaPredicted RBP14.31□□□□□ -0.12
MECP2-211ENST00000496908 OR6B2Q6IFH4 312 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 C11orf57Q6ZUT1 292 aaPredicted RBP14.31□□□□□ -0.12
MECP2-211ENST00000496908 DHX40Q8IX18 779 aaKnown RBP14.31□□□□□ -0.12
MECP2-211ENST00000496908 CAMK1GQ96NX5 476 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 RSPH9Q9H1X1 276 aaPredicted RBP14.31□□□□□ -0.12
MECP2-211ENST00000496908 SLC32A1Q9H598 525 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 IL21RQ9HBE5 538 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.31□□□□□ -0.12
MECP2-211ENST00000496908 SERGEFQ9UGK8 458 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 ERVW-1Q9UQF0 538 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.31□□□□□ -0.12
MECP2-211ENST00000496908 FHOD1Q9Y613 1164 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 ZFHX4Q86UP3 3567 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 AKAP13Q12802 2813 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 WDFY3Q8IZQ1 3526 aa14.31□□□□□ -0.12
MECP2-211ENST00000496908 KNL1Q8NG31 2342 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 F5H5T6 163 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 BCAT2O15382 392 aaPredicted RBP14.3□□□□□ -0.12
MECP2-211ENST00000496908 DAB1O75553 588 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 SEMA4FO95754 770 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 DNTTP04053 509 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 TFE3P19532 575 aaPredicted RBP14.3□□□□□ -0.12
MECP2-211ENST00000496908 GGCXP38435 758 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 STK19P49842 368 aaPredicted RBP14.3□□□□□ -0.12
MECP2-211ENST00000496908 ST8SIA6P61647 398 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 SIM1P81133 766 aaPredicted RBP14.3□□□□□ -0.12
MECP2-211ENST00000496908 CDK17Q00537 523 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 CENPCQ03188 943 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 ZBTB16Q05516 673 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 ARID5BQ14865 1188 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 DRAP1Q14919 205 aaPredicted RBP14.3□□□□□ -0.12
MECP2-211ENST00000496908 EFHC1Q5JVL4 640 aa14.3□□□□□ -0.12
MECP2-211ENST00000496908 C9orf64Q5T6V5 341 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms