RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 DCAF12L1Q5VU92 463 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 OTUD1Q5VV17 481 aaPredicted RBP15.61■□□□□ 0.09
NEK4-206ENST00000496822 OR6B2Q6IFH4 312 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 RABEPKQ7Z6M1 372 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 FAM71AQ8IYT1 594 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 ZCCHC9Q8N567 271 aaKnown RBP15.61■□□□□ 0.09
NEK4-206ENST00000496822 ZNF557Q8N988 423 aaPredicted RBP15.61■□□□□ 0.09
NEK4-206ENST00000496822 CADM4Q8NFZ8 388 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 DNASE2BQ8WZ79 361 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 BTN2A3PQ96KV6 586 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 PRMT1Q99873 361 aaKnown RBP15.61■□□□□ 0.09
NEK4-206ENST00000496822 ADAM33Q9BZ11 813 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 ASNSD1Q9NWL6 643 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 DDIT4Q9NX09 232 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 DACH1Q9UI36 760 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 ANGPTL2Q9UKU9 493 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 SLCO1B1Q9Y6L6 691 aa15.61■□□□□ 0.09
NEK4-206ENST00000496822 TPRP12270 2363 aaKnown RBP15.6■□□□□ 0.09
NEK4-206ENST00000496822 METTL12A8MUP2 240 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 KCNU1A8MYU2 1149 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 H0Y626 953 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 PES1O00541 588 aaKnown RBP15.6■□□□□ 0.09
NEK4-206ENST00000496822 HSF2BPO75031 334 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 SIN3BO75182 1162 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 DAB1O75553 588 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 GLI1P08151 1106 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 ACSL1P33121 698 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 KRT9P35527 623 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 GGCXP38435 758 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 CDK17Q00537 523 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 SEMA3BQ13214 749 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 DRAP1Q14919 205 aaPredicted RBP15.6■□□□□ 0.09
NEK4-206ENST00000496822 EFHC1Q5JVL4 640 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 C11orf57Q6ZUT1 292 aaPredicted RBP15.6■□□□□ 0.09
NEK4-206ENST00000496822 PIP4P1Q86T03 277 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 APCDD1Q8J025 514 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 ATP6V0D2Q8N8Y2 350 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 NUP58Q9BVL2 599 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 MIR1-1HGQ9H1L0 117 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 C6orf106Q9H6K1 298 aaPredicted RBP15.6■□□□□ 0.09
NEK4-206ENST00000496822 TAB2Q9NYJ8 693 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 SUSD2Q9UGT4 822 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 CHD8Q9HCK8 2581 aa15.6■□□□□ 0.09
NEK4-206ENST00000496822 PI4KAP42356 2102 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 ASCC3Q8N3C0 2202 aaKnown RBP15.59■□□□□ 0.09
NEK4-206ENST00000496822 F5H5T6 163 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 TOP3BO95985 862 aaKnown RBP15.59■□□□□ 0.09
NEK4-206ENST00000496822 ASLP04424 464 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 CEACAM1P13688 526 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 TFE3P19532 575 aaPredicted RBP15.59■□□□□ 0.09
NEK4-206ENST00000496822 IRAK1P51617 712 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 SHC2P98077 582 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 CENPCQ03188 943 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 GRIK2Q13002 908 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 NME3Q13232 169 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 HNRNPA1L2Q32P51 320 aaKnown RBP15.59■□□□□ 0.09
NEK4-206ENST00000496822 TCP11X2Q5H9J9 407 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 KLHDC7AQ5VTJ3 777 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 ZNF776Q68DI1 518 aaPredicted RBP15.59■□□□□ 0.09
NEK4-206ENST00000496822 SLC26A9Q7LBE3 791 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 DHX40Q8IX18 779 aaKnown RBP15.59■□□□□ 0.09
NEK4-206ENST00000496822 HDDC3Q8N4P3 179 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 NOX5Q96PH1 765 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 NAA15Q9BXJ9 866 aaKnown RBP15.59■□□□□ 0.09
NEK4-206ENST00000496822 FBRSQ9HAH7 460 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.59■□□□□ 0.09
NEK4-206ENST00000496822 EIF2B4Q9UI10 523 aaKnown RBP15.59■□□□□ 0.09
NEK4-206ENST00000496822 ERVW-1Q9UQF0 538 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 NFE2L3Q9Y4A8 694 aa15.59■□□□□ 0.09
NEK4-206ENST00000496822 EPG5Q9HCE0 2579 aa15.58■□□□□ 0.09
NEK4-206ENST00000496822 A0A1B0GTW7 788 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 TTC34A8MYJ7 566 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 OPHN1O60890 802 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 GJB3O75712 270 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 DNTTP04053 509 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 SYPP08247 313 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 CD59P13987 128 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 CYP11B1P15538 503 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 GNSP15586 552 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 SPINK2P20155 84 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 ABCB4P21439 1286 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 CCR1P32246 355 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 STK19P49842 368 aaPredicted RBP15.58■□□□□ 0.08
NEK4-206ENST00000496822 ST8SIA6P61647 398 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 BNC1Q01954 994 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 SLC6A3Q01959 620 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 FOXC1Q12948 553 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 TAF3Q5VWG9 929 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 SMYD5Q6GMV2 418 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 CXorf57Q6NSI4 855 aaKnown RBP15.58■□□□□ 0.08
NEK4-206ENST00000496822 FBXL22Q6P050 247 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 CCDC117Q8IWD4 279 aaPredicted RBP15.58■□□□□ 0.08
NEK4-206ENST00000496822 CCAR2Q8N163 923 aaKnown RBP15.58■□□□□ 0.08
NEK4-206ENST00000496822 OR52K2Q8NGK3 314 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 GPT2Q8TD30 523 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 SNX19Q92543 992 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 RNF34Q969K3 372 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 IGSF8Q969P0 613 aa15.58■□□□□ 0.08
NEK4-206ENST00000496822 RPL10LQ96L21 214 aaKnown RBP15.58■□□□□ 0.08
NEK4-206ENST00000496822 RSPH9Q9H1X1 276 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms