RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 LRRTM3Q86VH5 581 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 TTC30AQ86WT1 665 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 DNAAF5Q86Y56 855 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 TTC16Q8NEE8 873 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 CEP76Q8TAP6 659 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 TRMT2BQ96GJ1 504 aaKnown RBP13.77□□□□□ -0.21
PHGDH-207ENST00000496756 RUNDC3BQ96NL0 473 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 TRPC7Q9HCX4 862 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 PCDHA3Q9Y5H8 950 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 WNT6Q9Y6F9 365 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 IGSF10Q6WRI0 2623 aa13.77□□□□□ -0.21
PHGDH-207ENST00000496756 ANK1P16157 1881 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 CCDC151A5D8V7 595 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 K7EQS6 105 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 ZNF185O15231 689 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 DDX3YO15523 660 aaKnown RBP13.76□□□□□ -0.21
PHGDH-207ENST00000496756 CAPNS1P04632 268 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 CFIP05156 583 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 CXCR5P32302 372 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 SCNN1AP37088 669 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 ACADSBP45954 432 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 SEC13P55735 322 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 RPL10AP62906 217 aaKnown RBP13.76□□□□□ -0.21
PHGDH-207ENST00000496756 USP4Q13107 963 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 SOWAHCQ53LP3 525 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-207ENST00000496756 LYSMD4Q5XG99 296 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 DENND1BQ6P3S1 775 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 RABEPKQ7Z6M1 372 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 PDZD3Q86UT5 571 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 RHOT1Q8IXI2 618 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 TMEFF1Q8IYR6 380 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 ADGRF2Q8IZF7 708 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 CHCHD4Q8N4Q1 142 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 CCDC33Q8N5R6 958 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 NIPA2Q8N8Q9 360 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 MYRFLQ96LU7 910 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 POLMQ9NP87 494 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-207ENST00000496756 TMEM74BQ9NUR3 256 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.76□□□□□ -0.21
PHGDH-207ENST00000496756 SLC6A14Q9UN76 642 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 PACSIN2Q9UNF0 486 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-207ENST00000496756 V9GYY5 206 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-207ENST00000496756 LAMA5O15230 3695 aa13.76□□□□□ -0.21
PHGDH-207ENST00000496756 FLNBO75369 2602 aaKnown RBP13.75□□□□□ -0.21
PHGDH-207ENST00000496756 PTPRDP23468 1912 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 TMEM191CA6NGB0 347 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 SIGLEC16A6NMB1 481 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 TMEM110-MUSTN1A8MSY1 372 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 ATMINO43313 823 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-207ENST00000496756 ATP8B1O43520 1251 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 OPHN1O60890 802 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 TCF3P15923 654 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 H2AFXP16104 143 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-207ENST00000496756 PCSK1P29120 753 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 PTGER3P43115 390 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 GPD2P43304 727 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 BCAT1P54687 386 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 PDCLQ13371 301 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 DUOXA1Q1HG43 343 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 PEAR1Q5VY43 1037 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-207ENST00000496756 WSCD1Q658N2 575 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 C8orf74Q6P047 294 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 TMCO3Q6UWJ1 677 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 ARMCX6Q7L4S7 300 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 RAB44Q7Z6P3 723 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-207ENST00000496756 WDTC1Q8N5D0 677 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 LRRN4CLQ8ND94 238 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 HNRNPLLQ8WVV9 542 aaKnown RBP13.75□□□□□ -0.21
PHGDH-207ENST00000496756 TWNKQ96RR1 684 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 PSMB7Q99436 277 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 MRPL45Q9BRJ2 306 aaKnown RBP13.75□□□□□ -0.21
PHGDH-207ENST00000496756 BCCIPQ9P287 314 aaKnown RBP eCLIP13.75□□□□□ -0.21
PHGDH-207ENST00000496756 TMEM59LQ9UK28 342 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 PILRBQ9UKJ0 227 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 RAB21Q9UL25 225 aa13.75□□□□□ -0.21
PHGDH-207ENST00000496756 SCN1AP35498 2009 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
PHGDH-207ENST00000496756 TCRBV5S1A1TA0A578 114 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 PDE2AO00408 941 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-207ENST00000496756 SERPINF2P08697 491 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 KRT3P12035 628 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 OPRD1P41143 372 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 PEX5P50542 639 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 DNA2P51530 1060 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 PSMC1P62191 440 aaKnown RBP13.74□□□□□ -0.21
PHGDH-207ENST00000496756 BST2Q10589 180 aaKnown RBP13.74□□□□□ -0.21
PHGDH-207ENST00000496756 LONRF2Q1L5Z9 754 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 GOLGA7BQ2TAP0 167 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 EOGTQ5NDL2 527 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 PPP1R15BQ5SWA1 713 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 C19orf48Q6RUI8 117 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 TMEM92Q6UXU6 159 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 MAATS1Q7Z4T9 603 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 ANKRD52Q8NB46 1076 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 SH3RF2Q8TEC5 729 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 RLN3Q8WXF3 142 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms