RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 CNOT3O75175 753 aaKnown RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 CNTN5O94779 1100 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 ALDOAP04075 364 aaKnown RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 ITGA2BP08514 1039 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3HP0C7X1 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 GRK5P34947 590 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 SERPINF1P36955 418 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 FAM3BP58499 235 aaPredicted RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 SHC2P98077 582 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TLE3Q04726 772 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 SF3A3Q12874 501 aaKnown RBP eCLIP4.26□□□□□ -1.732e-12■■■□□ 18.6
CD46-218ENST00000496723 CHAF1AQ13111 956 aaPredicted RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 MORC3Q14149 939 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 ATPAF1Q5TC12 328 aaPredicted RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 LIPMQ5VYY2 423 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3GQ6DHY5 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3CQ6IPX1 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 ZNF474Q6S9Z5 364 aaPredicted RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 MEPCEQ7L2J0 689 aaKnown RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3Q8IZP1 549 aaPredicted RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 ARL14EPQ8N8R7 260 aaPredicted RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 HMGB4Q8WW32 186 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 ZFPM2Q8WW38 1151 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 RSC1A1Q92681 617 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 EID2BQ96D98 161 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 RTKNQ9BST9 563 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 SFXN1Q9H9B4 322 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 ERVK-5Q9HDB9 667 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 DACT1Q9NYF0 836 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 HEY2Q9UBP5 337 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 CNTN6Q9UQ52 1028 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 FAM90A18PA6NE21 464 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 FAM90A16PA6NEW6 464 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 C3orf70A6NLC5 250 aaPredicted RBP4.25□□□□□ -1.73
CD46-218ENST00000496723 FAM90A9PA6NNJ1 464 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 SLC38A8A6NNN8 435 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 FAM90A5PA8MXJ8 464 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 F8W810 466 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 LARGE1O95461 756 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 SGPL1O95470 568 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 FAM90A15PP0C7V4 464 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 FAM90A14PP0C7W9 464 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 TGM2P21980 687 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 FOXL2P58012 376 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 RHBDL3P58872 404 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 RBM6P78332 1123 aaKnown RBP4.25□□□□□ -1.73
CD46-218ENST00000496723 MTX1Q13505 466 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 TRIM60Q495X7 471 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 KLHL17Q6TDP4 642 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 PIP4P1Q86T03 277 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 ADGRF3Q8IZF5 1079 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 FAM47BQ8NA70 645 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 SMRP1Q8NCR6 262 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 ADPRHL1Q8NDY3 354 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 ZNF347Q96SE7 839 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 RMDN3Q96TC7 470 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 BRD8Q9H0E9 1235 aa4.25□□□□□ -1.73
CD46-218ENST00000496723 FOXP1Q9H334 677 aaPredicted RBP4.25□□□□□ -1.73
CD46-218ENST00000496723 PAPOLBQ9NRJ5 636 aaKnown RBP4.25□□□□□ -1.73
CD46-218ENST00000496723 LIN7CQ9NUP9 197 aaKnown RBP4.25□□□□□ -1.73
CD46-218ENST00000496723 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.25□□□□□ -1.73
CD46-218ENST00000496723 HERC5Q9UII4 1024 aaKnown RBP4.25□□□□□ -1.73
CD46-218ENST00000496723 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.25□□□□□ -1.73
CD46-218ENST00000496723 TTBK1Q5TCY1 1321 aaPredicted RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 ACKR2O00590 384 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 ACTL6BO94805 426 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 CSTBP04080 98 aaKnown RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 CYP3A4P08684 503 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 ALDOCP09972 364 aaKnown RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 IGFBP2P18065 325 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 POLE2P56282 527 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 OS9Q13438 667 aaPredicted RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 BLMHQ13867 455 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 TRIM14Q14142 442 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 PGM5Q15124 567 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 CCDC38Q502W7 563 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 LIN54Q6MZP7 749 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 NFRKBQ6P4R8 1299 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 TMEM88Q6PEY1 159 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 SLC44A2Q8IWA5 706 aaPredicted RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 CCDC117Q8IWD4 279 aaPredicted RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 ZNF548Q8NEK5 533 aaPredicted RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 SCAMP5Q8TAC9 235 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 CLEC4CQ8WTT0 213 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 ZFYVE19Q96K21 471 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 LYZL4Q96KX0 146 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 TRMOQ9BU70 441 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 TUBB6Q9BUF5 446 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 HTATIP2Q9BUP3 242 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 SORBS1Q9BX66 1292 aaKnown RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 OSBPL5Q9H0X9 879 aaPredicted RBP4.24□□□□□ -1.73
CD46-218ENST00000496723 PRDM8Q9NQV8 689 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 DAPP1Q9UN19 280 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 SLC8A2Q9UPR5 921 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 HS3ST3B1Q9Y662 390 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 LMTK3Q96Q04 1460 aa4.24□□□□□ -1.73
CD46-218ENST00000496723 CYP3A7-CYP3A51PA0A087WV96 503 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 TRBV5-3A0A0A0MS03 114 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 AGAP5A6NIR3 686 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms