RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CRADDP78560 199 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 NIPAL4Q0D2K0 466 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 CRYMQ14894 314 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 ASRGL1Q7L266 308 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 NLRP9Q7RTR0 991 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 PID1Q7Z2X4 250 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 TAC4Q86UU9 113 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 NPWQ8N729 165 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 HASPINQ8TF76 798 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 RSPH1Q8WYR4 309 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 HDAC11Q96DB2 347 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 TRIM55Q9BYV6 548 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 BRD8Q9H0E9 1235 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 TKTL2Q9H0I9 626 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 WDCPQ9H6R7 721 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 PCMTD2Q9NV79 361 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 SYBUQ9NX95 663 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 PLLPQ9Y342 182 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 PLXNA3P51805 1871 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 KCNK1O00180 336 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 MTSS1O43312 755 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 ATP5HO75947 161 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 MX2P20592 715 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 KCNJ2P63252 427 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 OVGP1Q12889 678 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 MAPRE1Q15691 268 aaKnown RBP13.4□□□□□ -0.26
GARNL3-220ENST00000496711 SPDYAQ5MJ70 313 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 MROH9Q5TGP6 573 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 BSPRYQ5W0U4 402 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 OVOS1Q6IE37 1185 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 CCSAPQ6IQ19 270 aaPredicted RBP13.4□□□□□ -0.26
GARNL3-220ENST00000496711 TRIM42Q8IWZ5 723 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 OR10T2Q8NGX3 314 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 ARNTL2Q8WYA1 636 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 TMLHEQ9NVH6 421 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 TMEM51Q9NW97 253 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 PIH1D1Q9NWS0 290 aaKnown RBP13.4□□□□□ -0.26
GARNL3-220ENST00000496711 NOD1Q9Y239 953 aa13.4□□□□□ -0.26
GARNL3-220ENST00000496711 FNDC1Q4ZHG4 1894 aaPredicted RBP13.39□□□□□ -0.27
GARNL3-220ENST00000496711 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.39□□□□□ -0.27
GARNL3-220ENST00000496711 HMX2A2RU54 273 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 TGDSO95455 350 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
GARNL3-220ENST00000496711 TSPY1Q01534 308 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 GALNT2Q10471 571 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 FAM26DQ5JW98 314 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 TIFABQ6ZNK6 161 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 THEM5Q8N1Q8 247 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 PCSK9Q8NBP7 692 aaKnown RBP13.39□□□□□ -0.27
GARNL3-220ENST00000496711 DQX1Q8TE96 717 aaKnown RBP13.39□□□□□ -0.27
GARNL3-220ENST00000496711 ZIC5Q96T25 663 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 ARHGEF3Q9NR81 526 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 OR12D3Q9UGF7 316 aa13.39□□□□□ -0.27
GARNL3-220ENST00000496711 ERI2A8K979 691 aaKnown RBP13.38□□□□□ -0.27
GARNL3-220ENST00000496711 LRIG2O94898 1065 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 AP2A1O95782 977 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 EPHB2P29323 1055 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 CRHR1P34998 444 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 GARSP41250 739 aaKnown RBP13.38□□□□□ -0.27
GARNL3-220ENST00000496711 TRIM71Q2Q1W2 868 aaKnown RBP13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ITPRIPL1Q6GPH6 555 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 PACS1Q6VY07 963 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 BEND5Q7L4P6 421 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 UNC5BQ8IZJ1 945 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 NDUFAF2Q8N183 169 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 KIF2BQ8N4N8 673 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ARMC2Q8NEN0 867 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 RFWD2Q8NHY2 731 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 SUSD3Q96L08 255 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 TMEM209Q96SK2 561 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 GORASP1Q9BQQ3 440 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 SLC13A1Q9BZW2 595 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 GBA3Q9H227 469 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 TRMT13Q9NUP7 481 aaKnown RBP13.38□□□□□ -0.27
GARNL3-220ENST00000496711 DCTN4Q9UJW0 460 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 SNX10Q9Y5X0 201 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 NYNRINQ9P2P1 1898 aaKnown RBP13.38□□□□□ -0.27
GARNL3-220ENST00000496711 INPPL1O15357 1258 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 IGLV3-25P01717 112 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 POLBP06746 335 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 TYMPP19971 482 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 YY1P25490 414 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 CYP2C18P33260 490 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 MNAT1P51948 309 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 RIPK1Q13546 671 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ITGA7Q13683 1181 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 PLEKHG4Q58EX7 1191 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 SPANXN3Q5MJ09 141 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ZNF449Q6P9G9 518 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 DCLRE1AQ6PJP8 1040 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ZNF598Q86UK7 904 aaKnown RBP13.38□□□□□ -0.27
GARNL3-220ENST00000496711 RASSF3Q86WH2 238 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 RAB3IL1Q8TBN0 382 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ACMSDQ8TDX5 336 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 RNF34Q969K3 372 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 VAT1Q99536 393 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms