RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 CD320Q9NPF0 282 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 PLK2Q9NYY3 685 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 STIM2Q9P246 746 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 PPARGC1AQ9UBK2 798 aaKnown RBP18.92■□□□□ 0.62
TSSC4-210ENST00000496468 PIAS3Q9Y6X2 628 aa18.92■□□□□ 0.62
TSSC4-210ENST00000496468 LRRD1A4D1F6 860 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 FGF10O15520 208 aaPredicted RBP18.91■□□□□ 0.62
TSSC4-210ENST00000496468 CACNG3O60359 315 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 EPHB2P29323 1055 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 HOXC13P31276 330 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 GJA4P35212 333 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 IRAK1P51617 712 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 CDH18Q13634 790 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 PDK2Q15119 407 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 C5orf22Q49AR2 442 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 ATP13A4Q4VNC1 1196 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 CHST9Q7L1S5 443 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 MFN1Q8IWA4 741 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 CCDC117Q8IWD4 279 aaPredicted RBP18.91■□□□□ 0.62
TSSC4-210ENST00000496468 UBL4BQ8N7F7 174 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 KCTD6Q8NC69 237 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 P2RY11Q96G91 374 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 MSANTD3Q96H12 275 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 XPO6Q96QU8 1125 aaKnown RBP18.91■□□□□ 0.62
TSSC4-210ENST00000496468 ZNF670Q9BS34 389 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 CALN1Q9BXU9 219 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 HEBP1Q9NRV9 189 aa18.91■□□□□ 0.62
TSSC4-210ENST00000496468 RCOR3Q9P2K3 495 aaPredicted RBP18.91■□□□□ 0.62
TSSC4-210ENST00000496468 PACSIN2Q9UNF0 486 aaPredicted RBP18.91■□□□□ 0.62
TSSC4-210ENST00000496468 MYO10Q9HD67 2058 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 LUC7L3O95232 432 aaKnown RBP18.9■□□□□ 0.62
TSSC4-210ENST00000496468 GOT1P17174 413 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 CTHP32929 405 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 SOX9P48436 509 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 DNA2P51530 1060 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 CDH4P55283 916 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 AMPD2Q01433 879 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 DPYSL3Q14195 570 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 GAB4Q2WGN9 574 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 RNF43Q68DV7 783 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 RFX8Q6ZV50 586 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 TFAP2DQ7Z6R9 452 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 C12orf40Q86WS4 652 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 MAP7D3Q8IWC1 876 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 KATNAL2Q8IYT4 538 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 CARNMT1Q8N4J0 409 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 ZNF557Q8N988 423 aaPredicted RBP18.9■□□□□ 0.62
TSSC4-210ENST00000496468 RBM41Q96IZ5 413 aaKnown RBP18.9■□□□□ 0.62
TSSC4-210ENST00000496468 C8orf33Q9H7E9 229 aaPredicted RBP18.9■□□□□ 0.62
TSSC4-210ENST00000496468 CATSPERBQ9H7T0 1116 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 DNAJC17Q9NVM6 304 aaKnown RBP18.9■□□□□ 0.62
TSSC4-210ENST00000496468 MPP6Q9NZW5 540 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 FBXL21Q9UKT6 434 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 DOCK4Q8N1I0 1966 aa18.9■□□□□ 0.62
TSSC4-210ENST00000496468 DRGXA6NNA5 263 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.89■□□□□ 0.61
TSSC4-210ENST00000496468 SPECC1L-ADORA2AF8WAN1 911 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 PI4K2BG5E9Z4 385 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 DAPK3O43293 454 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 CLDN11O75508 207 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 CNTN5O94779 1100 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 CD48P09326 243 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 RHOQP17081 205 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 ARSEP51690 589 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 RWDD2BP57060 319 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 MLF2Q15773 248 aaPredicted RBP18.89■□□□□ 0.61
TSSC4-210ENST00000496468 ALFQ53S48 1182 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 ZNF569Q5MCW4 686 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 ARTNQ5T4W7 220 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 ETFBKMTQ8IXQ9 262 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 NAT16Q8N8M0 369 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 FAM71BQ8TC56 605 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 UBE2Q2Q8WVN8 375 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 RAPGEF5Q92565 580 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 HES6Q96HZ4 224 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 CSPG4P5Q96PW8 444 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 ARHGEF3Q9NR81 526 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
TSSC4-210ENST00000496468 CA14Q9ULX7 337 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 PCDHA3Q9Y5H8 950 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 MIA3Q5JRA6 1907 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 MYOFQ9NZM1 2061 aa18.89■□□□□ 0.61
TSSC4-210ENST00000496468 H0Y626 953 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 KDELR1P24390 212 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 EIF2DP41214 584 aaKnown RBP18.88■□□□□ 0.61
TSSC4-210ENST00000496468 KDSRQ06136 332 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 DPYSQ14117 519 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 MEI1Q5TIA1 1274 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 TPRG1Q6ZUI0 275 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 NLRP14Q86W24 1093 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 RALGPS2Q86X27 583 aaPredicted RBP18.88■□□□□ 0.61
TSSC4-210ENST00000496468 VSIG1Q86XK7 387 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 CCDC50Q8IVM0 306 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 SLC35F6Q8N357 371 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 RTL3Q8N8U3 475 aaKnown RBP18.88■□□□□ 0.61
TSSC4-210ENST00000496468 EXD1Q8NHP7 514 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 TSC1Q92574 1164 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 EXOC4Q96A65 974 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 CHFRQ96EP1 664 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 ARHGEF4Q9NR80 690 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms