RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 VCPIP1Q96JH7 1222 aa9.29□□□□□ -0.92
HPS4-217ENST00000496385 RAB20Q9NX57 234 aa9.29□□□□□ -0.92
HPS4-217ENST00000496385 CDC14AQ9UNH5 594 aa9.29□□□□□ -0.92
HPS4-217ENST00000496385 A0A1W2PPW3 197 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 C7orf72A4D263 438 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 CLDN25C9JDP6 229 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 CAPN15O75808 1086 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 FAM13AO94988 1023 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 BCL10O95999 233 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ZSCAN5DPP0CG00 497 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 TCEA1P23193 301 aaKnown RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 ME2P23368 584 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 KPNA1P52294 538 aaPredicted RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 PEX3P56589 373 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 RFTN1Q14699 578 aaPredicted RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 ZNF618Q5T7W0 954 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 TEDDM1Q5T9Z0 273 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 POTEGQ6S5H5 508 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ISLR2Q6UXK2 745 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 PRR23CQ6ZRP0 262 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 CDHR3Q6ZTQ4 885 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 SIAH1Q8IUQ4 282 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 C12orf56Q8IXR9 622 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 UBR7Q8N806 425 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 KYQ8NBH2 561 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ANGPTL6Q8NI99 470 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 STON2Q8WXE9 905 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 S100ZQ8WXG8 99 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 DDX1Q92499 740 aaKnown RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 CPT1BQ92523 772 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 PDZD7Q9H5P4 517 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 GPN2Q9H9Y4 310 aaPredicted RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 HMG20AQ9NP66 347 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 C8orf4Q9NR00 106 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 MARCOQ9UEW3 520 aaPredicted RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 CCL15-CCL14A0A0B4J2E2 113 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 TCRBV9S1A1TA0A576 114 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ILVBLA1L0T0 632 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 FAM172BPA6NC97 362 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 TRIM49D1C9J1S8 452 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 TIMM44O43615 452 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 GMNNO75496 209 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 MYO1DO94832 1006 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ERBB2P04626 1255 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 WEE2P0C1S8 567 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 UNGP13051 313 aaPredicted RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 IDH3AP50213 366 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 MRPS5P82675 430 aaKnown RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 BNIP3Q12983 259 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 CCL15Q16663 113 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ASPRV1Q53RT3 343 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 FGD3Q5JSP0 725 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 WDR45BQ5MNZ6 344 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 NOL9Q5SY16 702 aaKnown RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 FNBP1LQ5T0N5 605 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 FAXCQ5TGI0 409 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 BTBD8Q5XKL5 378 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 FAM117BQ6P1L5 589 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ZNF720Q7Z2F6 126 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 SLC47A2Q86VL8 602 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 PGAM4Q8N0Y7 254 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 RASSF5Q8WWW0 418 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 TANKQ92844 425 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 UHRF1Q96T88 793 aaPredicted RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 PTPN18Q99952 460 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 APOL6Q9BWW8 343 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 TMEM117Q9H0C3 514 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 CNGB3Q9NQW8 809 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 GINM1Q9NU53 330 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 PARVAQ9NVD7 372 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ARMC1Q9NVT9 282 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 THG1LQ9NWX6 298 aaKnown RBP9.28□□□□□ -0.92
HPS4-217ENST00000496385 DNAJC16Q9Y2G8 782 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 AFG3L2Q9Y4W6 797 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 ANGPTL3Q9Y5C1 460 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 N6AMT1Q9Y5N5 214 aa9.28□□□□□ -0.92
HPS4-217ENST00000496385 RBBP6Q7Z6E9 1792 aaKnown RBP9.27□□□□□ -0.92
HPS4-217ENST00000496385 A0A1B0GTW7 788 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 RGSL1A5PLK6 1076 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 GOLGA8MH3BSY2 632 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 PEX10O60683 326 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 ENO2P09104 434 aaPredicted RBP9.27□□□□□ -0.93
HPS4-217ENST00000496385 SPATA31C1P0DKV0 1188 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 C7P10643 843 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 MYF6P23409 242 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 NUMBP49757 651 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 VAMP7P51809 220 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SPIRE1Q08AE8 756 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 KCNA1Q09470 495 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 KLF10Q13118 480 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SELENBP1Q13228 472 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 PPP2R5DQ14738 602 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 ARHGEF6Q15052 776 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 TREML2Q5T2D2 321 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 LIN9Q5TKA1 542 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 CES4AQ5XG92 561 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 KIAA1841Q6NSI8 718 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 TIFABQ6ZNK6 161 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms