RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 KIAA1324Q6UXG2 1013 aaKnown RBP4.21□□□□□ -1.74
CLK1-214ENST00000496205 SYNE3Q6ZMZ3 975 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 TEX19Q8NA77 164 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 PRSS3P2Q8NHM4 247 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 CLEC4CQ8WTT0 213 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 NSMCE1Q8WV22 266 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 GOLGA1Q92805 767 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 TRMT61AQ96FX7 289 aaKnown RBP4.21□□□□□ -1.74
CLK1-214ENST00000496205 MPP4Q96JB8 637 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 VCPIP1Q96JH7 1222 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 MAELQ96JY0 434 aaKnown RBP4.21□□□□□ -1.74
CLK1-214ENST00000496205 RITA1Q96K30 269 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 PPM1MQ96MI6 270 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 CCDC134Q9H6E4 229 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 KLHL13Q9P2N7 655 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 TRPC5Q9UL62 973 aaPredicted RBP4.21□□□□□ -1.74
CLK1-214ENST00000496205 CES2O00748 559 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 TJP3O95049 919 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 CD4P01730 458 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 CNPP09543 421 aaKnown RBP4.2□□□□□ -1.74
CLK1-214ENST00000496205 CSF1P09603 554 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 ATP1A3P13637 1013 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 CREB1P16220 341 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 ENGP17813 658 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 ADRA1DP25100 572 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 AARSP49588 968 aaKnown RBP eCLIP4.2□□□□□ -1.74
CLK1-214ENST00000496205 PAPOLAP51003 745 aaKnown RBP4.2□□□□□ -1.74
CLK1-214ENST00000496205 PDE1AP54750 535 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 NR1H2P55055 460 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 FOXL2P58012 376 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 RPL15P61313 204 aaKnown RBP4.2□□□□□ -1.74
CLK1-214ENST00000496205 MPP1Q00013 466 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 SEMA3BQ13214 749 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 G3BP1Q13283 466 aaKnown RBP eCLIP4.2□□□□□ -1.74
CLK1-214ENST00000496205 DNASE1L3Q13609 305 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 SLC12A1Q13621 1099 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 RPS6KA2Q15349 733 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 DLGAP5Q15398 846 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 FAM187BQ17R55 369 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 ANKRD40Q6AI12 368 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 ZNF804AQ7Z570 1209 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 LINS1Q8NG48 757 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 WDR60Q8WVS4 1066 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 HTRA1Q92743 480 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 SDCCAG3Q96C92 435 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 KAZALD1Q96I82 304 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 THAP7Q9BT49 309 aaPredicted RBP4.2□□□□□ -1.74
CLK1-214ENST00000496205 DPCDQ9BVM2 203 aaPredicted RBP4.2□□□□□ -1.74
CLK1-214ENST00000496205 PLEKHA2Q9HB19 425 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 WASH6PQ9NQA3 447 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 DUSP22Q9NRW4 184 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 NDUFAF4Q9P032 175 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 NKX1-2Q9UD57 310 aaPredicted RBP4.2□□□□□ -1.74
CLK1-214ENST00000496205 ANAPC4Q9UJX5 808 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 SH2B3Q9UQQ2 575 aa4.2□□□□□ -1.74
CLK1-214ENST00000496205 NKX2-8O15522 239 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 HOXC11O43248 304 aaPredicted RBP4.19□□□□□ -1.74
CLK1-214ENST00000496205 FGBP02675 491 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 CD19P15391 556 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 ATP5F1P24539 256 aaPredicted RBP4.19□□□□□ -1.74
CLK1-214ENST00000496205 CDK7P50613 346 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 TPTEP56180 551 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 NANOS2P60321 138 aaKnown RBP4.19□□□□□ -1.74
CLK1-214ENST00000496205 GPC5P78333 572 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 LMAN2Q12907 356 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 GAB1Q13480 694 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 DCTN1Q14203 1278 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 ST3GAL2Q16842 350 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 TEDDM1Q5T9Z0 273 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 ANKRD45Q5TZF3 282 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 DGAT2L7PQ6IED9 249 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 PTCHD4Q6ZW05 846 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 BBS12Q6ZW61 710 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 KRT27Q7Z3Y8 459 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 WDR53Q7Z5U6 358 aaPredicted RBP4.19□□□□□ -1.74
CLK1-214ENST00000496205 P3H2Q8IVL5 708 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 RBMXL3Q8N7X1 1067 aaKnown RBP4.19□□□□□ -1.74
CLK1-214ENST00000496205 NAXEQ8NCW5 288 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 CPT1BQ92523 772 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 COQ8BQ96D53 544 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 KTI12Q96EK9 354 aaPredicted RBP4.19□□□□□ -1.74
CLK1-214ENST00000496205 EDC3Q96F86 508 aaKnown RBP4.19□□□□□ -1.74
CLK1-214ENST00000496205 FSD1LQ9BXM9 530 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 AGXT2Q9BYV1 514 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 ZCWPW1Q9H0M4 648 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 UBN1Q9NPG3 1134 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 TLR8Q9NR97 1041 aaKnown RBP4.19□□□□□ -1.74
CLK1-214ENST00000496205 RASSF1Q9NS23 344 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 TERF2IPQ9NYB0 399 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 VPS4AQ9UN37 437 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 PCDHA10Q9Y5I2 948 aa4.19□□□□□ -1.74
CLK1-214ENST00000496205 LY6G6EA0A0G2JKS1 128 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 A6NLC8 198 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 EFCAB8A8MWE9 144 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 PSMD9O00233 223 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 LARGE1O95461 756 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 TFRCP02786 760 aaKnown RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 ALPLP05186 524 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 TMIGD3P0DMS9 266 aaPredicted RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 LYL1P12980 280 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms