RNA–Protein interactions for RNA: ENST00000495357.1

CCDC39-AS1-201, CCDC39 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene CCDC39-AS1, Length 283 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-AS1-201ENST00000495357 UGDHO60701 494 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 SKAP2O75563 359 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TGM2P21980 687 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 GRK5P34947 590 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 CDK7P50613 346 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 PLCD1P51178 756 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 SF3A3Q12874 501 aaKnown RBP eCLIP5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 AWAT2Q6E213 333 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 LIN54Q6MZP7 749 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 C1orf228Q6PIY5 440 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ATG16L2Q8NAA4 619 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 MPLKIPQ8TAP9 179 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ATP2A3Q93084 1043 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 RTKNQ9BST9 563 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TUBB6Q9BUF5 446 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 FOXP1Q9H334 677 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 SFXN1Q9H9B4 322 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 MLXIPQ9HAP2 919 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 AGO2Q9UKV8 859 aaKnown RBP5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 LZTS1Q9Y250 596 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 LRP12Q9Y561 859 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 HS3ST3B1Q9Y662 390 aa5.12□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 KIR2DS5A0A0G2JLQ3 304 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 C3orf70A6NLC5 250 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 F8W810 466 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 KIR2DS3K7RE56 304 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 LARGE1O95461 756 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ALDOAP04075 364 aaKnown RBP5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TNFRSF1BP20333 461 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ME1P48163 572 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 RHBDL3P58872 404 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ICA1Q05084 483 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 BRD3Q15059 726 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 LEXMQ3ZCV2 418 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 KIAA1755Q5JYT7 1200 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ZNF569Q5MCW4 686 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 RUSC1-AS1Q66K80 236 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TTLL5Q6EMB2 1281 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ADGRF4Q8IZF3 695 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 PAQR4Q8N4S7 273 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 SCAMP5Q8TAC9 235 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 STT3BQ8TCJ2 826 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 CLEC4CQ8WTT0 213 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 POF1BQ8WVV4 589 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 RMDN3Q96TC7 470 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 MPHOSPH6Q99547 160 aaKnown RBP5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 IL21RQ9HBE5 538 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TXNRD2Q9NNW7 524 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 SEMA4BQ9NPR2 832 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 PRDM8Q9NQV8 689 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ZBTB40Q9NUA8 1239 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 MSRB1Q9NZV6 116 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 HERC5Q9UII4 1024 aaKnown RBP5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 DAPP1Q9UN19 280 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 LMTK3Q96Q04 1460 aa5.11□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ACKR2O00590 384 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 PRPF4O43172 522 aaKnown RBP eCLIP5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ATG13O75143 517 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ACTL6BO94805 426 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 CSTBP04080 98 aaKnown RBP5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ITGA2BP08514 1039 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ALDOCP09972 364 aaKnown RBP5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TMEM88Q6PEY1 159 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 RTL10Q7L3V2 364 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 MDGA2Q7Z553 956 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 SLC44A2Q8IWA5 706 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 CACNA2D3Q8IZS8 1091 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 MMP21Q8N119 569 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 FAM47BQ8NA70 645 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 SLC44A5Q8NCS7 719 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ADPRHL1Q8NDY3 354 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 HMGB4Q8WW32 186 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 NPAS1Q99742 590 aa5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 PABPC3Q9H361 631 aaKnown RBP5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 COPG1Q9Y678 874 aaKnown RBP5.1□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ZNF335Q9H4Z2 1342 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3DA0A087WVF3 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3IA0A087WXS9 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3EA0A087X179 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3KA0A087X1G2 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 A0A1W2PPC1 479 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3BA6NDS4 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3FA6NER0 549 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 MBD3L5A6NJ08 208 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3LB9A6J9 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 F5H423 210 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3HP0C7X1 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 POLE2P56282 527 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TTC22Q5TAA0 569 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ATPAF1Q5TC12 328 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 ASPHD1Q5U4P2 390 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3GQ6DHY5 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3CQ6IPX1 549 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 NFRKBQ6P4R8 1299 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 TBC1D3Q8IZP1 549 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 VPS37AQ8NEZ2 397 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 HTATIP2Q9BUP3 242 aa5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 SORBS1Q9BX66 1292 aaKnown RBP5.09□□□□□ -1.59
CCDC39-AS1-201ENST00000495357 OSBPL5Q9H0X9 879 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms