RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TRIM22Q8IYM9 498 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 SLC22A18ASQ8N1D0 253 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 NUP93Q8N1F7 819 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 OR13H1Q8NG92 308 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 CXorf38Q8TB03 319 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 TNFRSF25Q93038 417 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 GRAMD1AQ96CP6 724 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 KLHDC7BQ96G42 594 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 ZNF560Q96MR9 790 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 DUSP9Q99956 384 aaKnown RBP9.3□□□□□ -0.92
GARNL3-219ENST00000495172 MRPL45Q9BRJ2 306 aaKnown RBP9.3□□□□□ -0.92
GARNL3-219ENST00000495172 B3GNT5Q9BYG0 378 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 PRDM8Q9NQV8 689 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.92
GARNL3-219ENST00000495172 KLHL11Q9NVR0 708 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 DNAJC28Q9NX36 388 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 KLF15Q9UIH9 416 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 LSM7Q9UK45 103 aaKnown RBP9.3□□□□□ -0.92
GARNL3-219ENST00000495172 PCDHB11Q9Y5F2 797 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 EME2A4GXA9 379 aaPredicted RBP9.29□□□□□ -0.92
GARNL3-219ENST00000495172 LATO43561 262 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 TCEA3O75764 348 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 STC2O76061 302 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 KRT19P08727 400 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 ZDHHC11BP0C7U3 371 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 OAS2P29728 719 aaKnown RBP9.29□□□□□ -0.92
GARNL3-219ENST00000495172 CDC25AP30304 524 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 SLC8A1P32418 973 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 MCM7P33993 719 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 SLC5A3P53794 718 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 STAT4Q14765 748 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 GALNT17Q6IS24 598 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 RINT1Q6NUQ1 792 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 CRELD2Q6UXH1 353 aaPredicted RBP9.29□□□□□ -0.92
GARNL3-219ENST00000495172 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.29□□□□□ -0.92
GARNL3-219ENST00000495172 C1orf186Q6ZWK4 172 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 TIPARPQ7Z3E1 657 aaKnown RBP9.29□□□□□ -0.92
GARNL3-219ENST00000495172 DSG4Q86SJ6 1040 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 ADIPOR2Q86V24 386 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 SLC35F3Q8IY50 421 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 TMEM86AQ8N2M4 240 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 ZNF548Q8NEK5 533 aaPredicted RBP9.29□□□□□ -0.92
GARNL3-219ENST00000495172 MYCBPAPQ8TBZ2 947 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 WFDC5Q8TCV5 224 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 NKD1Q969G9 470 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 NAP1L4Q99733 375 aaKnown RBP9.29□□□□□ -0.92
GARNL3-219ENST00000495172 ESYT1Q9BSJ8 1104 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 NMUR1Q9HB89 426 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 ABCB8Q9NUT2 735 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 CYTH4Q9UIA0 394 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 SIX4Q9UIU6 781 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 CDH9Q9ULB4 789 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 DERAQ9Y315 318 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 C2CD2Q9Y426 696 aa9.29□□□□□ -0.92
GARNL3-219ENST00000495172 PKDREJQ9NTG1 2253 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 TARSL2A2RTX5 802 aaKnown RBP9.28□□□□□ -0.92
GARNL3-219ENST00000495172 PP2D1A8MPX8 630 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 NTN3O00634 580 aaPredicted RBP9.28□□□□□ -0.92
GARNL3-219ENST00000495172 SLC31A1O15431 190 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 SLC6A4P31645 630 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 LHX1P48742 406 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 CCL7P80098 99 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 EIF4HQ15056 248 aaKnown RBP9.28□□□□□ -0.92
GARNL3-219ENST00000495172 TCEA2Q15560 299 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 NADK2Q4G0N4 442 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 SNX30Q5VWJ9 437 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 SP5Q6BEB4 398 aaPredicted RBP9.28□□□□□ -0.92
GARNL3-219ENST00000495172 ASB18Q6ZVZ8 466 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 UNC5BQ8IZJ1 945 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 CSGALNACT2Q8N6G5 542 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 PDZD8Q8NEN9 1154 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 MYO19Q96H55 970 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 NTPCRQ9BSD7 190 aaKnown RBP9.28□□□□□ -0.92
GARNL3-219ENST00000495172 PLA2G4CQ9UP65 541 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.28□□□□□ -0.92
GARNL3-219ENST00000495172 MN1Q10571 1320 aaPredicted RBP9.28□□□□□ -0.92
GARNL3-219ENST00000495172 JMJD1CQ15652 2540 aa9.28□□□□□ -0.92
GARNL3-219ENST00000495172 A0A1W2PQM1 296 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 SNPHO15079 494 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 CNTN5O94779 1100 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 SNRPB2P08579 225 aaKnown RBP9.27□□□□□ -0.93
GARNL3-219ENST00000495172 CCL4P13236 92 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 PLS3P13797 630 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 SGSHP51688 502 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 C1orf61Q13536 156 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 NR0B2Q15466 257 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 TPRG1LQ5T0D9 272 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 ZCCHC8Q6NZY4 707 aaKnown RBP9.27□□□□□ -0.93
GARNL3-219ENST00000495172 GPRIN1Q7Z2K8 1008 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 PRPF39Q86UA1 669 aaKnown RBP9.27□□□□□ -0.93
GARNL3-219ENST00000495172 IQCHQ86VS3 1027 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 CD302Q8IX05 232 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 TOP6BLQ8N6T0 577 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 TMC2Q8TDI7 906 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 DDI1Q8WTU0 396 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 JAKMIP2Q96AA8 810 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 RNF31Q96EP0 1072 aa9.27□□□□□ -0.93
GARNL3-219ENST00000495172 JAKMIP1Q96N16 626 aaKnown RBP9.27□□□□□ -0.93
GARNL3-219ENST00000495172 TSPAN18Q96SJ8 248 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms