RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CNTD1Q8N815 330 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 ACVR1CQ8NER5 493 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 ZSCAN18Q8TBC5 510 aaPredicted RBP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 MOCOSQ96EN8 888 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 MYEOVQ96EZ4 313 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 SUSD3Q96L08 255 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 EBNA1BP2Q99848 306 aaKnown RBP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 MLPHQ9BV36 600 aaPredicted RBP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 PITPNM3Q9BZ71 974 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 ACSS2Q9NR19 701 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 RGS18Q9NS28 235 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 SAMD15Q9P1V8 674 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 PHTF1Q9UMS5 762 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 SCN5AQ14524 2016 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 PTPRDP23468 1912 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 CCDC195A0A1B0GUA6 201 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 H3BRJ5 948 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 PRPF4O43172 522 aaKnown RBP eCLIP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 GJB3O75712 270 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 MT-CYBP00156 380 aaPredicted RBP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 APOEP02649 317 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 CYP11A1P05108 521 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 INHBAP08476 426 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 NR2C2P49116 596 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 NOGQ13253 232 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 MTFR1Q15390 333 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 ATG14Q6ZNE5 492 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 SPATA21Q7Z572 469 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 PCSK9Q8NBP7 692 aaKnown RBP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 BCL7CQ8WUZ0 217 aaPredicted RBP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 ZNF75CPQ92670 426 aaPredicted RBP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 TTC17Q96AE7 1141 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 DNAI2Q9GZS0 605 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 RASSF4Q9H2L5 321 aa10.68□□□□□ -0.7
SAMM50-206ENST00000494795 DMAP1Q9NPF5 467 aaPredicted RBP10.68□□□□□ -0.7
SAMM50-206ENST00000494795 DFFAO00273 331 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 RFPL1O75677 317 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 MAGEA6P43360 314 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 CXCR3P49682 368 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 XRCC4Q13426 336 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 PAFAH1B3Q15102 231 aaKnown RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 PPM1JQ5JR12 505 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 C16orf46Q6P387 395 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 OTOAQ7RTW8 1153 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 RFWD2Q8NHY2 731 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 AGAP2Q99490 1192 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 C20orf27Q9GZN8 174 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ATXN3LQ9H3M9 355 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ZNF358Q9NW07 568 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 KLHL8Q9P2G9 620 aaPredicted RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 KANSL3Q9P2N6 904 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 USP15Q9Y4E8 981 aaPredicted RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 PTCH2Q9Y6C5 1203 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 REV3LO60673 3130 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 VNN2O95498 520 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 JCHAINP01591 159 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 MT-ND3P03897 115 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 DESP17661 470 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 RPL17P18621 184 aaKnown RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 NFKB1P19838 968 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 BGNP21810 368 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ACTN3Q08043 901 aaPredicted RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 DSC1Q08554 894 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 NOMO2Q5JPE7 1267 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 FAM26DQ5JW98 314 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 SLC24A5Q71RS6 500 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 TRPM8Q7Z2W7 1104 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 CIR1Q86X95 450 aaPredicted RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 SPATA2LQ8IUW3 424 aaPredicted RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 RIBC1Q8N443 379 aaPredicted RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 SMC1BQ8NDV3 1235 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 MFSD3Q96ES6 412 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 PCMTD2Q9NV79 361 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 DCTN4Q9UJW0 460 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ACTL7BQ9Y614 415 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 CFAP69A5D8W1 941 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ADAM12O43184 909 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 LPXNO60711 386 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 PAGE1O75459 146 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 HMBSP08397 361 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ETV4P43268 484 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 CCL23P55773 120 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 KLHL38Q2WGJ6 581 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 DCLRE1AQ6PJP8 1040 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ZCCHC23Q6ZST2 131 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 METTL23Q86XA0 190 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ZNF296Q8WUU4 475 aaPredicted RBP10.67□□□□□ -0.7
SAMM50-206ENST00000494795 TSPAN18Q96SJ8 248 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 NPHS2Q9NP85 383 aa10.67□□□□□ -0.7
SAMM50-206ENST00000494795 ATP9BO43861 1147 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 FBXO21O94952 628 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 PRKCHP24723 683 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 IL9RQ01113 521 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 EIF4EBP2Q13542 120 aaPredicted RBP10.66□□□□□ -0.7
SAMM50-206ENST00000494795 PPP2R5DQ14738 602 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 HHATQ5VTY9 493 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 FAM171A1Q5VUB5 890 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 GLB1LQ6UWU2 654 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 TFAP2DQ7Z6R9 452 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms